cibersort. problem
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8 months ago
gem1 ▴ 10

Hi, I am building gene expression matrix with cibersortx and I got this error

Error in rep(2, size * (length(cells) - 1)) : invalid 'times' argument
Calls: CIBERSORTxFractions -> makeRefandClassFiles
Execution halted

Does anyone encounter this before? What's the issue would be?. Thank you sooo much in advance.

cibersort gema122 • 696 views
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I'm also struggling with the same problem, or error. Did you encounter it when you create signature matrix from scRNA-seq? I'm using expression matrix aggregated by annotated cell types with Seurat. It doesn't work... I also need help for the issue...

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Hi, fyfy. I hope you are well. I am having the same problem and also used Seurat. I want to ask you if you resolved it. Thank you so much for your answer.

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Hi, Gem1. I hope you are well. I am having the same problem. I want to ask you if you resolved it. Thank you so much for your answer.

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