Using cutadapt for phased primer cleaning

Question

[1769mkc]

This is one of the paperfor phased primer where they have made a tool called MetReTrim, is it possible to use cutadapt to do the same.

[Mark]

Why not use the tool provided?

[1769mkc]

yes that what i did since it cutadapt i did try few option if it can do the same or not its not working as such