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I'm using R. I'd like to:
- load up a series matrix file i downloaded onto a library like SeSAMe or minfi
- Do some basic optimization on them like beta value analysis, noob normalization
- Export the files on my computer as csv or some other common data file type to import into python and do machine learning with it
If you could:
- Explain how to load up a Series Matrix file onto one of those libraries for analysis or normalization
- explain how to export the Series Matrix file as a csv or some other data type to load them onto python for predictions
Or link to some resources, it'd be of great help.
Thanks.