Entering edit mode
19 days ago
chiyong4783
•
0
I am currently using the script to process structural variants (SVs) in my project, and I encountered the following error while running the clusterSVs function in the script located at doc/mc-paper/fly/cluster-svs.R:
It seems that there is an issue related to the reduce function not being able to handle the list signature.it need GRanges. I suspect that there might be a step where the input data needs to be transformed or processed differently before passing it to clusterSVs. Specifically, I would like to know if there are any additional preprocessing steps required for the svs object before using it in the clusterSVs function.
