Edit Dataset FASTQ files using ReadStore Command Line Interface
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3 months ago
DNAStar • 0

Hi there,

I am using ReadStore to manage my NGS datasets and FASTQ files.

I am trying to change the FASTQ read 1 / read 2 files which are attached to one dataset, and move them to another dataset using the ReadStore CLI. However I am not sure if this is possible at all since, since the dataset does not seem to support FASTQ file definition:

usage: readstore dataset create [options]

Create a Dataset

options:
  -h, --help            show this help message and exit
  -n , --name           Dataset Name
  --description         Set Description (default '')
  -m META, --meta META  Set metadata as JSON string (e.g '{"key": "value"}') (default '{}')
  -pid , --project-id   Set Project ID (optional)
  -p , --project-name   Set Project Name (optional)

Anybody more experience with the CLI? Thank you

FASTQ Readstore CLI • 241 views
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This is commercial software, so usually we recommend to contact their support.

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