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2 days ago
aiswaryabioinfo
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30
I am trying to run burden test using Plink/Seq tool. I have a set of control and diseased vcf files for rare disease. I am getting a message like this while attempting burden test in Plink/Seq
pseq Aparna_BT assoc --tests burden --phenotype phenotype
LOCUS POS ALIAS NVAR TEST P I DESC
pseq error : no grouping mask specified with a group command
Can anyone guide me how to use group masking feature