Issue with BSgenomeForge::forgeBSgenomeDataPkgFromNCBI
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4 days ago
noodle ▴ 650

Hi Biostars, can someone advise if there is a simple fix for the below error?

> BSgenomeForge::forgeBSgenomeDataPkgFromNCBI(assembly_accession="GCA_002915635.3")
Error in .Call2("read_fasta_blocks", seqlengths, filexp_list, nrec_list,  : 
  negative length vectors are not allowed
R BSgenomeForge BSgenome NCBI • 245 views
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I cannot reproduce this since it will immediately complain that no package maintainer was added. You also miss the sessionInfo. Please post over at support.bioconductor.org together with version details and OS. Also be sure to upgrade to most recent version of R and Bioc.

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