How To Take Care Of Broadpeak Format?
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10.7 years ago
liu4gre ▴ 210

I downloaded expression profiles in broadpeak format from ENCODE. All are performed on Exon Array platform. I am wondering how to get the gene expression from this type of file?

chr1 18964 19130 2390581 900 - 157.9387 -1 -1

chr1 19466 19705 2315110 500 + 34.62301 -1 -1

chr1 19500 19699 2390582 900 - 135.6528 -1 -1

chr1 20238 20569 2390583 1000 - 555.8951 -1 -1

microarray • 1.6k views
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