Create Instances From Position Frequency Matrix
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10.7 years ago
b.schaefke ▴ 10

How can I create instances from a position frequency matrix (in a transfac format motif) using the biopython motifs (not the old Motif) package and search for their occurence in a given sequence?

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Why would you want to search for a random instance of the motif instead of the whole motif? Using the motif to search is more sensitive than an instance.

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