Limit : this year
all time today this week this month this year
760 results • Page 1 of 16
Sort: Votes
Rank Views Votes Replies
797
votes
167
replies
143k
views
109 follow
News: The Biostar Handbook. A bioinformatics e-book for beginners.
training handbook
updated 3 months ago by 2.8k • written 7.4 years ago by 100k
122
votes
44
replies
11k
views
24 follow
News: Help Make Biostar Better! Add Your Feedback, Opinions And Suggestions.
meta biostars
updated 6 months ago by 43k • written 11.5 years ago by 100k
38
votes
8
replies
1.7k
views
6 follow
News: What happens when a bioinformatician has his own genome sequenced for $300?
DNAseq DNA WGS
updated 11 months ago by 35k • written 11 months ago by 11k
38
votes
7
replies
2.3k
views
News: 2 last seats available - 7th Berlin Summer School in NGS Data Analysis (September 4-8 in Berlin)
Transcriptomics DNA-Seq Variant-Calling RNA-Seq
9 months ago by David Langenberger 11k
24
votes
21
replies
7.6k
views
9 follow
News: Misunderstood parameter of NCBI BLAST
blast alignment
updated 11 months ago by 43k • written 5.6 years ago by ★ 3.4k
14
votes
3
replies
3.7k
views
News: Updated: Conference/Symposium/Seminar/Workshop alert 2018-2019
seminar symposium conference
updated 11 months ago by 43k • written 6.0 years ago by 5.8k
14
votes
11
replies
3.0k
views
6 follow
News: Announcing bioSyntax: Syntax highlighting for biological files
computational-biology
updated 12 months ago by 43k • written 6.4 years ago by ▴ 170
13
votes
2
replies
1.5k
views
News: Thank you Biostars!
meta
updated 11 months ago by 43k • written 5.0 years ago by ▴ 140
13
votes
9
replies
2.7k
views
7 follow
News: Inviting NEW Biostars moderators to join Biostars slack channel
slack moderator
7 months ago by GenoMax 142k
12
votes
2
replies
510
views
News: 8th Berlin Summer School in NGS Data Analysis (June 10-14, 2024) - already half booked
Workshop RNA-Seq DNA-Seq Illumina
5 weeks ago by David Langenberger 11k
12
votes
4
replies
2.1k
views
News: #NGSchool2018 summer school in bioinformatics
NGSchool Personalised-Medicine Nanopore
updated 11 months ago by 43k • written 6.0 years ago by ▴ 290
11
votes
11
replies
1.8k
views
8 follow
News: Python Data Visualization Course. Last 3 spots left
next-gen
updated 11 months ago by 43k • written 5.5 years ago by ★ 2.5k
10
votes
0
replies
2.1k
views
News: Pan-Cancer Analysis of RNA Binding Proteins in ~7000 tumor samples
Pan-Cancer mutations TCGA RNA-seq cancer-driver
updated 12 months ago by 43k • written 6.3 years ago by ▴ 860
10
votes
4
replies
1.8k
views
News: 3rd Berlin Summer School in NGS Data Analysis (2 seats just became available)
NGS RNA-Seq DNA-Seq
updated 11 months ago by 43k • written 5.3 years ago by 11k
9
votes
4
replies
1.6k
views
News: Human Cell Atlas Data Coordination Platform Data Release Questionaire
RNA-Seq
updated 12 months ago by 43k • written 6.2 years ago by ★ 1.8k
9
votes
4
replies
2.5k
views
7 follow
News: fastp 0.22 released, with new FASTQ deduplication feature.
fastp
updated 9 months ago by 43k • written 2.7 years ago by ★ 2.5k
9
votes
3
replies
4.8k
views
News: Bioinformatics Contest 2020. Call for problems
contest
updated 11 months ago by 43k • written 4.7 years ago by ▴ 930
8
votes
2
replies
841
views
News: FINAL CALL - Single-Cell RNA-Seq Data Analysis: A Practical Introduction (May 6-8, 2024 in Berlin)
single-cell sequencing
5 weeks ago by David Langenberger 11k
8
votes
8
replies
2.9k
views
News: Coronavirus Genome Analysis: a new volume in the Biostar Handbook
biostar-handbook education
updated 11 months ago by 43k • written 4.2 years ago by 100k
8
votes
0
replies
1.3k
views
News: Final Call - Hands-On RNA-Seq Data Analysis Workshop - only 2 seats left
data-analysis RNA-Seq workshop
updated 11 months ago by 43k • written 4.9 years ago by 11k
8
votes
6
replies
1.5k
views
News: Illumina to Acquire Pacific Biosciences
pacbio illumina
updated 11 months ago by 43k • written 5.5 years ago by 100k
8
votes
4
replies
2.0k
views
News: supporting vg users on biostars
variation-graph genome vg vgteam
updated 11 months ago by 43k • written 4.7 years ago by ★ 2.4k
7
votes
2
replies
1.2k
views
News: NGS Data Analysis Workshops 2024
scRNA-seq dna-seq rna-seq nextflow
4 months ago by David Langenberger 11k
7
votes
0
replies
1.0k
views
News: New layout for NCBI BLAST FTP database site starting February 4, 2020
ftp blast blast_index blast-plus
updated 11 months ago by 43k • written 4.3 years ago by 142k
6
votes
2
replies
1.1k
views
News: Temporarily reduced functionality of Ensembl and Ensembl Genomes
Ensembl
updated 11 months ago by 43k • written 5.3 years ago by ★ 2.4k
6
votes
7
replies
2.3k
views
News: NCBI wants to remove quality scores from SRA
quality-scores trimming Assembly genome SRA
updated 11 months ago by 43k • written 3.9 years ago by ▴ 40
6
votes
1
reply
2.9k
views
News: "Oxford University Press to Publish NAR Genomics and Bioinformatics"
journal
updated 11 months ago by 43k • written 5.1 years ago by 161k
6
votes
4
replies
1.3k
views
News: Course online - Comparative Genomics
assembly genome next-gen alignment
updated 11 months ago by 43k • written 4.1 years ago by ★ 2.5k
6
votes
0
replies
2.3k
views
News: Bioinformatics internships with Google Summer of Code 2019
intern Ensembl GSOC
updated 11 months ago by 43k • written 5.2 years ago by 23k
6
votes
0
replies
978
views
News: CWL user support moving to https://cwl.discourse.group/; many thanks to Biostars for over 4 years of support!
cwl thanks
updated 11 months ago by 43k • written 4.6 years ago by ★ 1.9k
6
votes
1
reply
1.0k
views
News: uniprot.org is moving from HTTP to HTTPS
protein database uniprot
updated 12 months ago by 43k • written 6.4 years ago by ★ 2.4k
6
votes
13
replies
2.1k
views
News: Ensembl reduced functionality: 10th March-16th April 2020
BLAT VEP Ensembl service
updated 11 months ago by 43k • written 4.2 years ago by ★ 2.4k
5
votes
2
replies
1.5k
views
News: Google Dataset Search
google
updated 11 months ago by 43k • written 5.7 years ago by 161k
5
votes
2
replies
1.7k
views
News: #scRNABIO & organoids meeting
single-cell-sequencing microfluidics organoids
updated 11 months ago by 43k • written 5.8 years ago by ▴ 320
5
votes
3
replies
1.5k
views
News: Top GitHub repos for biomedicine
open-source software GitHub
updated 11 months ago by 43k • written 5.4 years ago by ▴ 50
5
votes
0
replies
1.5k
views
News: Bioinformatics in Google Summer of Code 2018
Ensembl GSOC
updated 12 months ago by 43k • written 6.3 years ago by 23k
5
votes
0
replies
949
views
News: sharing BiocWorkshops 2018
limma edgeR DESeq2 RNA-seq glimma
updated 11 months ago by 43k • written 5.7 years ago by ★ 1.4k
5
votes
1
reply
1.6k
views
News: 2-day WORKSHOP on SNAKEMAKE
next-gen
updated 11 months ago by 43k • written 5.9 years ago by ★ 2.5k
5
votes
2
replies
932
views
News: The precisionFDA BioCompute Object App-a-thon has been extended to October 18!
BioCompute challenge
updated 11 months ago by 43k • written 4.8 years ago by ▴ 70
5
votes
0
replies
2.3k
views
News: [UPDATED] Hands-On NGS Data Analysis Workshops 2019
NGS Bisulfite-Seq RNA-Seq DNA-Seq
updated 11 months ago by 43k • written 5.5 years ago by 11k
5
votes
0
replies
999
views
News: Free online Ensembl REST API training
perl rest-api jupyter python ensembl
updated 11 months ago by 43k • written 5.4 years ago by 23k
5
votes
0
replies
1.8k
views
News: Bioinformatics Contest 2019
bioinforussia bioinfcontest bioinfcontest2019
updated 11 months ago by 43k • written 5.5 years ago by ▴ 50
4
votes
0
replies
659
views
News: A Practical Introduction to Single-Cell RNA-Seq Data Analysis (November 8-10, 2023 in Berlin, Germany)
NGS RNA-Seq single-cell workshop
11 months ago by David Langenberger 11k
4
votes
2
replies
1.3k
views
News: Hands-On Workshop: How to use bisulfite-treated sequencing to study DNA methylation (BS-Seq, Bisulfite-Seq, WGBS)
Workshop methylation bisulfite
updated 11 months ago by 43k • written 4.6 years ago by ★ 1.0k
4
votes
3
replies
1.1k
views
News: You may need to cleanup duplicate NCBI BLAST nt database volumes on your system
databases NCBI BLAST
8 months ago by PeterC_NCBI ▴ 410
4
votes
1
reply
1.9k
views
News: Bioinformatics Contest 2018
contest
updated 12 months ago by 43k • written 6.4 years ago by ▴ 40
4
votes
0
replies
725
views
News: Call for Bioinformatics Papers - Genes Special Issue
gene
updated 11 months ago by 43k • written 4.4 years ago by ▴ 740
4
votes
0
replies
1.0k
views
News: SIG Workshop to discuss developments in computational pathology and its interfacing opportunities with bioinformatics during ECCB 2018
microscopy wsi digital-pathology
updated 11 months ago by 43k • written 5.8 years ago by ▴ 40
4
votes
0
replies
1.2k
views
News: Workshop for genomic data visualization and interpretation
R RNA-Seq ggplot2 genomics
updated 11 months ago by 43k • written 5.4 years ago by 20k
4
votes
2
replies
611
views
News: Standalone NCBI ClusteredNR database now available for download
ClusteredNR NCBI standalone BLAST
8 months ago by PeterC_NCBI ▴ 410
760 results • Page 1 of 16
Recent Votes
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
lncRNA and ncPEPs identification
Answer: Identifying common DEGs among multiple datasets
Answer: ggrepel function: geom_text_repel()
Comment: switch off warning in blast command line
Forward And Reverse Strand Conventions
Answer: Would you bother re-mapping RNA-seq data from an old GRCh38 build to a newer ver
Recent Locations • All
France, just now
ETH Zurich, just now
France, 1 minute ago
Spain, 1 minute ago
Spain, 2 minutes ago
Russia, 4 minutes ago
India, 5 minutes ago
Recent Awards • All
Teacher to Rob 6.6k
Popular Question to Nyksubuz ▴ 10
Popular Question to Govardhan Anande ▴ 150
Popular Question to Lhl ▴ 760
Popular Question to Takuma ▴ 20
Popular Question to BATMAN • 0
Teacher to dario.garvan ▴ 520
Recent Replies
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i by egascon • 0
Thank you very much again. I have learned a lot of things.
Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i by egascon • 0
It's a microarryay experiment, not RNASeq
Comment: Sam file Header problem by Pierre Lindenbaum 161k
https://gatk.broadinstitute.org/hc/en-us/articles/360035890671-Read-groups
Answer: Faster Needleman-Wunsch rapid global alignment of two sequences? by DGTool ▴ 20
I have also recently come across another global alignment algorithm that was recently released which could seem pretty interesting to test …
Comment: Faster Needleman-Wunsch rapid global alignment of two sequences? by b.contreras.moreira ▴ 190
Not sure, you might ask in the repo, please share here the response if you find it
Answer: How to generate table_annovar from VCF input? by LucisTheFather • 0
Would you be more specific to your question? Do you mean how to debug this syntax error?
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU by hophuquy0944 • 0
thank you
Comment: How to extract cells of different species after mapping with combined genome? by Tony • 0
I think this method should be applicable to all high-throughput single-cell RNA-seq platforms. Although the method of determining cell spec…
Comment: BiomartException: Query ERROR for existing dataset in BioMart by Nyksubuz ▴ 10
The dataset you want (taestivum_eg_gene) exists within the "plants_mart" schema, not the default schema. Your current code assumes the defa…
Comment: Add line under stat test by Nyksubuz ▴ 10
You could use [this][1] [1]: https://ggplot2.tidyverse.org/reference/geom_segment.html
Comment: API kegg - IndexError: list index out of range by Nyksubuz ▴ 10
It might be because the gene symbol is not found in the KEGG database. Add some extra error handling before parsing the results or do a man…
Comment: Sam file Header problem by saifulislam99121 • 0
Thank you for your reply. I am not very much sure about this RG. Can you explain me a bit?
Comment: GRIDSS: the Genomic Rearrangement IDentification Software Suite by dario.garvan ▴ 520
It seems that Alexandrov's [structural variant and copy number signatures][1] estimated by the [SigProfiler software ecosystem][2] aren't c…
Comment: Faster Needleman-Wunsch rapid global alignment of two sequences? by GenoMax 142k
Then you may want to see if a program like `lastz` ([**LINK**][1]) may be useful. [1]: https://github.com/lastz/lastz
Comment: Collect dispersed executable files and run them by using bingo. by Ram 43k
What is the purpose of this tool? I have `~/bin` in my $PATH and I soft-link all executables I need to that location so why install a new t…
Traffic: 2017 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6