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Issue converting VCF to MAF using snpEff annotations
vcf vcf2maf snpEff maf
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 1.3k
3
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4
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6.8k
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[Errno 8] Exec Format Error Using Tophat 1.3.1
tophat
updated 4.6 years ago by 20 • written 13.4 years ago by ★ 1.3k
0
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0
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4.3k
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Answer: A: How To Get A Full Proteome Of Helicobacter Pylori 26695.
updated 5.0 years ago by 44k • written 13.8 years ago by ★ 1.3k
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0
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4.8k
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Comment: C: Methods For Comparing Transcriptomes?
updated 5.2 years ago by 44k • written 13.2 years ago by ★ 1.3k
3
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1
reply
20k
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Answer: A: What % Of Reads Are You Usually Able To Align When Mapping Reads From Rna-Seq To
updated 5.2 years ago by 44k • written 13.1 years ago by ★ 1.3k
2
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0
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Answer: A: Human Transcriptome Mapping
updated 5.2 years ago by 44k • written 13.4 years ago by ★ 1.3k
3
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0
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6.7k
views
Answer: A: Any Examples Of Mturk/Crowdsourcing Projects In Bioinformatics?
updated 5.2 years ago by 44k • written 13.4 years ago by ★ 1.3k
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0
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4.4k
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Answer: A: Amplicon Sequencing
updated 5.2 years ago by 44k • written 13.7 years ago by ★ 1.3k
1
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0
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4.9k
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Answer: A: Convert Blast Table With Hsps To Alignment
updated 5.2 years ago by 44k • written 13.7 years ago by ★ 1.3k
1
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0
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133k
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Comment: C: Is There A Free Alternative To Ingenuity Pathway Analysis?
updated 5.2 years ago by 44k • written 13.7 years ago by ★ 1.3k
2
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1
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6.2k
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Answer: A: Output File Format "6" - Blastplus - Gene Name ?
updated 5.2 years ago by 44k • written 13.7 years ago by ★ 1.3k
0
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0
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29k
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Comment: C: How To Retrieve A .Fastaq File From Sra Using Wget? (And Not Aspera)
updated 5.2 years ago by 44k • written 13.8 years ago by ★ 1.3k
0
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0
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2.8k
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Comment: C: Are There Any Caveats When Creating A Maf File For Music?
updated 5.8 years ago by 44k • written 9.8 years ago by ★ 1.3k
3
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1
reply
18k
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Answer: A: How To Determine The Version Used To Generate Solexa/Illumina Fastq Files?
updated 6.2 years ago by 44k • written 13.2 years ago by ★ 1.3k
3
votes
2
replies
5.6k
views
Analysis With Cufflinks (Cuffdiff) Of Genes With No Gene Expression In One Of The Samples.
cufflinks cuffdiff gene
updated 6.6 years ago by 20 • written 12.7 years ago by ★ 1.3k
0
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5
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2.6k
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'Use Of Uninitialized Value' Message Using Solexaqa
illumina
updated 6.6 years ago by 20 • written 13.2 years ago by ★ 1.3k
2
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5
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3.2k
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is needed info (BAM and MAF) files for normal tissues in MUSIC?
music bam maf
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 1.3k
10
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8
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8.9k
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David For Rnaseq Data
gene rna
updated 2.4 years ago by 44k • written 12.9 years ago by ★ 1.3k
0
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0
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3.2k
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Comment: Comment: is needed info (BAM and MAF) files for normal tissues in MUSIC?
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 1.3k
9
votes
3
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7.0k
views
Equivalent Blast And Blast+ Commands
blast blast
updated 10.5 years ago by ▴ 20 • written 13.4 years ago by ★ 1.3k
0
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0
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11k
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Answer: A: Vdb Field In Samtools
11.7 years ago by Marina Manrique ★ 1.3k
0
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0
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6.0k
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Comment: C: Prokaryotic Rnaseq Analysis-The Basics
12.6 years ago by Marina Manrique ★ 1.3k
0
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0
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6.0k
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Answer: A: Prokaryotic Rnaseq Analysis-The Basics
12.6 years ago by Marina Manrique ★ 1.3k
0
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0
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5.6k
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Comment: C: Analysis With Cufflinks (Cuffdiff) Of Genes With No Gene Expression In One Of Th
12.7 years ago by Marina Manrique ★ 1.3k
0
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0
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8.9k
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Comment: C: David For Rnaseq Data
12.9 years ago by Marina Manrique ★ 1.3k
0
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0
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3.6k
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Comment: C: What Is Your Experience With Igenomes?
13.0 years ago by Marina Manrique ★ 1.3k
7
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1
reply
11k
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Answer: Answer: Bacterial Annotation Pipeline
updated 22 months ago by 44k • written 13.1 years ago by ★ 1.3k
3
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0
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2.9k
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Answer: A: Where To Get Downloadable Annotated Microbial Transcriptome Sequences?
13.1 years ago by Marina Manrique ★ 1.3k
0
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0
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21k
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Comment: C: Fastq Quality Check
13.1 years ago by Marina Manrique ★ 1.3k
0
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0
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2.6k
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Comment: C: 'Use Of Uninitialized Value' Message Using Solexaqa
13.1 years ago by Marina Manrique ★ 1.3k
4
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1
reply
13k
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Answer: A: Most "Accurate" Gtf File For Cufflinks??
13.2 years ago by Marina Manrique ★ 1.3k
0
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0
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3.6k
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Comment: C: What Is Your Experience With Igenomes?
13.2 years ago by Marina Manrique ★ 1.3k
0
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0
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2.6k
views
Comment: C: 'Use Of Uninitialized Value' Message Using Solexaqa
13.2 years ago by Marina Manrique ★ 1.3k
9
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4
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3.6k
views
What Is Your Experience With Igenomes?
cufflinks tophat illumina
updated 13.2 years ago by 16k • written 13.2 years ago by ★ 1.3k
0
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0
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4.7k
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Comment: C: Velvetg: 'Killed' During ___/___ Nodes Visited
13.2 years ago by Marina Manrique ★ 1.3k
0
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0
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3.3k
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Comment: C: Cufflinks Ouput Tracking-File Status
13.2 years ago by Marina Manrique ★ 1.3k
0
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0
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4.7k
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Comment: C: Velvetg: 'Killed' During ___/___ Nodes Visited
13.2 years ago by Marina Manrique ★ 1.3k
2
votes
3
replies
3.3k
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Answer: A: Cufflinks Ouput Tracking-File Status
13.2 years ago by Marina Manrique ★ 1.3k
0
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0
replies
2.7k
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Comment: C: Bacterial Diversity Identification With Normalized Libraries?
13.2 years ago by Marina Manrique ★ 1.3k
2
votes
0
replies
5.3k
views
Answer: A: Rna-Seq Tag Count
13.2 years ago by Marina Manrique ★ 1.3k
8
votes
0
replies
28k
views
Answer: A: Links To Good Next Gen Sequence Analysis Training Courses And Centres
13.2 years ago by Marina Manrique ★ 1.3k
1
vote
0
replies
5.6k
views
Answer: A: How The Go Slim Sets Predefined By Go Consortium Are Created?
13.2 years ago by Marina Manrique ★ 1.3k
8
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4
replies
5.6k
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How The Go Slim Sets Predefined By Go Consortium Are Created?
gene
13.3 years ago by Marina Manrique ★ 1.3k
1
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0
replies
9.1k
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Comment: C: Determining Fpkm Of De Novo Assembly Of Transcriptome
13.3 years ago by Marina Manrique ★ 1.3k
0
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0
replies
9.1k
views
Comment: C: Determining Fpkm Of De Novo Assembly Of Transcriptome
13.3 years ago by Marina Manrique ★ 1.3k
0
votes
0
replies
9.1k
views
Comment: C: Determining Fpkm Of De Novo Assembly Of Transcriptome
13.3 years ago by Marina Manrique ★ 1.3k
0
votes
8
replies
9.1k
views
Answer: A: Determining Fpkm Of De Novo Assembly Of Transcriptome
13.3 years ago by Marina Manrique ★ 1.3k
0
votes
0
replies
4.1k
views
Comment: C: Human Transcriptome Mapping
13.3 years ago by Marina Manrique ★ 1.3k
2
votes
1
reply
6.8k
views
Answer: A: [Errno 8] Exec Format Error Using Tophat 1.3.1
13.4 years ago by Marina Manrique ★ 1.3k
0
votes
0
replies
6.8k
views
Comment: C: [Errno 8] Exec Format Error Using Tophat 1.3.1
13.4 years ago by Marina Manrique ★ 1.3k
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