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381
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The best tool for Scaffolding
contigs scaffold assembly spades
updated 7 weeks ago by ★ 2.5k • written 4 months ago by ▴ 50
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0
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1.6k
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Comment: Comment: Interpreting phylogenetics tree
8 weeks ago by davidmaimoun ▴ 50
11
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17
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1.6k
views
6 follow
Interpreting phylogenetics tree
phylogenetic-tree itol phylogenetics
updated 8 weeks ago by 44k • written 10 weeks ago by ▴ 50
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2
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1.6k
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Comment: Comment: Interpreting phylogenetics tree
8 weeks ago by davidmaimoun ▴ 50
0
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0
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1.6k
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Comment: Comment: Interpreting phylogenetics tree
9 weeks ago by davidmaimoun ▴ 50
0
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2
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1.6k
views
Comment: Comment: Interpreting phylogenetics tree
9 weeks ago by davidmaimoun ▴ 50
0
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0
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1.6k
views
Comment: Comment: Interpreting phylogenetics tree
9 weeks ago by davidmaimoun ▴ 50
0
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2
replies
1.6k
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Comment: Comment: Interpreting phylogenetics tree
9 weeks ago by davidmaimoun ▴ 50
0
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0
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1.6k
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Comment: Comment: Interpreting phylogenetics tree
10 weeks ago by davidmaimoun ▴ 50
0
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0
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17k
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Comment: Comment: Generating consensus sequence from bam file
3 months ago by davidmaimoun ▴ 50
0
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1
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17k
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Comment: Comment: Generating consensus sequence from bam file
3 months ago by davidmaimoun ▴ 50
0
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0
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176
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Cannot Align My Consensus fasta
bcftools consensus alignment variant-calling
updated 3 months ago by 44k • written 3 months ago by ▴ 50
0
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1
reply
17k
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Comment: Comment: Generating consensus sequence from bam file
3 months ago by davidmaimoun ▴ 50
4
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7
replies
1.4k
views
COBS Indexing genomes - understand the output
indexing cobs genomes COBS
updated 4 months ago by • 0 • written 2.4 years ago by ▴ 50
0
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0
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339
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Comment: Comment: Minimum Spanning Tree for SNPs
4 months ago by davidmaimoun ▴ 50
0
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2
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339
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Minimum Spanning Tree for SNPs
mst matrix snp distance bowtie2
4 months ago by davidmaimoun ▴ 50
3
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4
replies
593
views
QC Analysis from Sanger sequencing
qc ab1 sanger
5 months ago by davidmaimoun ▴ 50
0
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0
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593
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Comment: Comment: QC Analysis from Sanger sequencing
5 months ago by davidmaimoun ▴ 50
0
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0
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593
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Comment: Comment: QC Analysis from Sanger sequencing
5 months ago by davidmaimoun ▴ 50
2
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8
replies
905
views
Blastn for all bacteria genomes; create the db
blast blastn
updated 10 months ago by 147k • written 10 months ago by ▴ 50
0
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1
reply
905
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Comment: Comment: Blastn for all bacteria genomes; create the db
10 months ago by davidmaimoun ▴ 50
0
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1
reply
905
views
Comment: Comment: Blastn for all bacteria genomes; create the db
10 months ago by davidmaimoun ▴ 50
0
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0
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615
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Comment: Comment: Blastn - matches with another species
10 months ago by davidmaimoun ▴ 50
0
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1
reply
615
views
Comment: Comment: Blastn - matches with another species
10 months ago by davidmaimoun ▴ 50
1
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4
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615
views
Blastn - matches with another species
blast blastn
10 months ago by davidmaimoun ▴ 50
0
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0
replies
263
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Shovill running error 256
shovill
updated 10 months ago by 44k • written 10 months ago by ▴ 50
0
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0
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1.1k
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Comment: Comment: Parallelization of task according to the cpu capacity
11 months ago by davidmaimoun ▴ 50
4
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8
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1.1k
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Parallelization of task according to the cpu capacity
parallelization cpu
11 months ago by davidmaimoun ▴ 50
0
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0
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1.1k
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Comment: Comment: Parallelization of task according to the cpu capacity
11 months ago by davidmaimoun ▴ 50
0
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0
replies
1.1k
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Comment: Comment: Parallelization of task according to the cpu capacity
11 months ago by davidmaimoun ▴ 50
0
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0
replies
1.1k
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Comment: Comment: Parallelization of task according to the cpu capacity
11 months ago by davidmaimoun ▴ 50
0
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0
replies
2.1k
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Comment: Comment: Docker: Pass reads file form host to container
12 months ago by davidmaimoun ▴ 50
0
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1
reply
2.1k
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Comment: Comment: Docker: Pass reads file form host to container
12 months ago by davidmaimoun ▴ 50
4
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8
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2.1k
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Docker: Pass reads file form host to container
docker
12 months ago by davidmaimoun ▴ 50
0
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0
replies
2.1k
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Comment: Comment: Docker: Pass reads file form host to container
12 months ago by davidmaimoun ▴ 50
3
votes
9
replies
2.8k
views
Nextflow - Wait for process ending to call the next one without output
nextflow
updated 13 months ago by ▴ 10 • written 16 months ago by ▴ 50
0
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4
replies
1.1k
views
Average Coverage after Assembly (Spades)
coverage average assembly
updated 13 months ago by 20k • written 2.3 years ago by ▴ 50
0
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0
replies
590
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Comment: Comment: Chewbbaca - explanation of the output
16 months ago by davidmaimoun ▴ 50
0
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2
replies
590
views
Chewbbaca - explanation of the output
chewbbaca
16 months ago by davidmaimoun ▴ 50
0
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0
replies
2.8k
views
Comment: Comment: Nextflow - Wait for process ending to call the next one without output
16 months ago by davidmaimoun ▴ 50
0
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0
replies
2.8k
views
Comment: Comment: Nextflow - Wait for process ending to call the next one without output
16 months ago by davidmaimoun ▴ 50
0
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1
reply
2.8k
views
Comment: Comment: Nextflow - Wait for process ending to call the next one without output
16 months ago by davidmaimoun ▴ 50
0
votes
0
replies
1.8k
views
Comment: Comment: Find Pathogenic Variants
19 months ago by davidmaimoun ▴ 50
3
votes
6
replies
1.8k
views
Find Pathogenic Variants
vcf variant-calling
19 months ago by davidmaimoun ▴ 50
0
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0
replies
1.8k
views
Comment: Comment: Find Pathogenic Variants
19 months ago by davidmaimoun ▴ 50
0
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1
reply
1.8k
views
Comment: Comment: Find Pathogenic Variants
19 months ago by davidmaimoun ▴ 50
0
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1
reply
1.1k
views
Comment: Comment: Average Coverage after Assembly (Spades)
2.3 years ago by davidmaimoun ▴ 50
0
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0
replies
377
views
Fetching schemes from pubMLST
Fetching pubMLST schemes cgMLST scheme
2.3 years ago by davidmaimoun ▴ 50
16
votes
10
replies
4.9k
views
Nextflow- cannot run bash script from Docker
script bash nextflow from docker
updated 2.4 years ago by 7.0k • written 2.4 years ago by ▴ 50
2
votes
0
replies
4.9k
views
Answer: Answer: Nextflow- cannot run bash script from Docker
2.4 years ago by davidmaimoun ▴ 50
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