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1
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4.7k
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Answer: C: Two Plink map/ped files refuse to merge.
9.4 years ago by devenvyas ▴ 760
0
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0
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3.2k
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Comment: C: Are Plink MDS plots supposed to complete so quickly?
9.4 years ago by devenvyas ▴ 760
0
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2
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3.2k
views
Are Plink MDS plots supposed to complete so quickly?
plink SNP mds
updated 23 months ago by 44k • written 9.4 years ago by ▴ 760
0
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1
reply
4.8k
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Comment: Comment: Merging two Plink datasets, but some sites have reversed genotypes
updated 23 months ago by 44k • written 9.4 years ago by ▴ 760
3
votes
3
replies
4.8k
views
Merging two Plink datasets, but some sites have reversed genotypes
plink SNP
updated 23 months ago by 44k • written 9.4 years ago by ▴ 760
1
vote
11
replies
4.3k
views
Need good way to run a Principle Component Analysis on SNP data
pca SNP
updated 23 months ago by 44k • written 9.4 years ago by ▴ 760
0
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0
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4.3k
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Comment: C: Need good way to run a Principle Component Analysis on SNP data
9.4 years ago by devenvyas ▴ 760
0
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1
reply
4.3k
views
Comment: C: Need good way to run a Principle Component Analysis on SNP data
9.4 years ago by devenvyas ▴ 760
0
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1
reply
4.3k
views
Comment: C: Large tab-delimited table of SNP data, how to filter out some rows based on rsID
9.4 years ago by devenvyas ▴ 760
0
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0
replies
1.9k
views
Axiom sample call-rate cut-off strictly 97%?
SNP affymetrix
updated 23 months ago by 44k • written 9.4 years ago by ▴ 760
0
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1
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4.3k
views
Comment: Comment: Need good way to run a Principle Component Analysis on SNP data
updated 23 months ago by 44k • written 9.4 years ago by ▴ 760
0
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0
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9.7k
views
Comment: C: Coding genotypes from nucleotides to 0/1/2 in R.
9.4 years ago by devenvyas ▴ 760
6
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12
replies
9.7k
views
Coding genotypes from nucleotides to 0/1/2 in R.
SNP R
updated 23 months ago by 44k • written 9.5 years ago by ▴ 760
0
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1
reply
9.7k
views
Comment: C: Coding genotypes from nucleotides to 0/1/2 in R.
9.4 years ago by devenvyas ▴ 760
0
votes
0
replies
9.7k
views
Comment: A: Coding genotypes from nucleotides to 0/1/2 in R.
9.4 years ago by devenvyas ▴ 760
0
votes
0
replies
9.7k
views
Comment: C: Coding genotypes from nucleotides to 0/1/2 in R.
9.4 years ago by devenvyas ▴ 760
0
votes
1
reply
6.4k
views
Comment: Comment: Need help transposing MAP file and PED file into one large table
updated 23 months ago by 44k • written 9.5 years ago by ▴ 760
0
votes
1
reply
6.4k
views
Comment: Comment: Need help transposing MAP file and PED file into one large table
updated 23 months ago by 44k • written 9.5 years ago by ▴ 760
0
votes
1
reply
6.4k
views
Comment: Comment: Need help transposing MAP file and PED file into one large table
updated 23 months ago by 44k • written 9.5 years ago by ▴ 760
0
votes
1
reply
6.4k
views
Comment: Comment: Need help transposing MAP file and PED file into one large table
updated 23 months ago by 44k • written 9.5 years ago by ▴ 760
0
votes
1
reply
6.4k
views
Comment: Comment: Need help transposing MAP file and PED file into one large table
updated 23 months ago by 44k • written 9.5 years ago by ▴ 760
0
votes
1
reply
6.4k
views
Comment: Comment: Need help transposing MAP file and PED file into one large table
updated 23 months ago by 44k • written 9.5 years ago by ▴ 760
0
votes
2
replies
6.4k
views
Comment: Comment: Need help transposing MAP file and PED file into one large table
updated 23 months ago by 44k • written 9.5 years ago by ▴ 760
4
votes
17
replies
6.4k
views
Need help transposing MAP file and PED file into one large table
SNP Python Bash
updated 23 months ago by 44k • written 9.5 years ago by ▴ 760
0
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0
replies
6.4k
views
Comment: C: Need help transposing MAP file and PED file into one large table
9.5 years ago by devenvyas ▴ 760
0
votes
1
reply
3.5k
views
Comment: Comment: Efficient means of mass converting Affy SNP IDs to dbSNP rs ids
updated 22 months ago by 44k • written 9.5 years ago by ▴ 760
0
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1
reply
3.5k
views
Comment: C: Efficient means of mass converting Affy SNP IDs to dbSNP rs ids
9.5 years ago by devenvyas ▴ 760
0
votes
1
reply
3.5k
views
Comment: C: Efficient means of mass converting Affy SNP IDs to dbSNP rs ids
9.5 years ago by devenvyas ▴ 760
1
vote
0
replies
4.3k
views
Comment: C: Large tab-delimited table of SNP data, how to filter out some rows based on rsID
9.5 years ago by devenvyas ▴ 760
0
votes
3
replies
4.3k
views
Comment: Comment: Large tab-delimited table of SNP data, how to filter out some rows based on rsID
updated 23 months ago by 44k • written 9.5 years ago by ▴ 760
5
votes
14
replies
4.3k
views
Large tab-delimited table of SNP data, how to filter out some rows based on rsIDs?
rsid python SNP
updated 22 months ago by 44k • written 9.5 years ago by ▴ 760
0
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0
replies
4.3k
views
Comment: Comment: Large tab-delimited table of SNP data, how to filter out some rows based on rsID
updated 22 months ago by 44k • written 9.5 years ago by ▴ 760
0
votes
1
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4.3k
views
Comment: Comment: Large tab-delimited table of SNP data, how to filter out some rows based on rsID
updated 22 months ago by 44k • written 9.5 years ago by ▴ 760
0
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0
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9.0k
views
Comment: Comment: Converting list of Affy SNP ids to dbSNP rs ids
9.6 years ago by devenvyas ▴ 760
0
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0
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4.0k
views
Comment: Comment: Affy Axiom array - many cases of two probe set IDs sharing the same Affy SNP ID
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 760
0
votes
2
replies
4.0k
views
Affy Axiom array - many cases of two probe set IDs sharing the same Affy SNP ID and dbSNP RS ID values. What's going on?
SNP Affymetrix
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 760
0
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0
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9.0k
views
Comment: C: Converting list of Affy SNP ids to dbSNP rs ids
9.6 years ago by devenvyas ▴ 760
0
votes
0
replies
1.9k
views
Regarding Affymetrix Axiom DNA 260/280 and 260/230 value requirements
nanodrop
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 760
3
votes
5
replies
2.2k
views
Getting the intersection of two dbSNP lists
snp
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 760
0
votes
8
replies
4.7k
views
Need code to filter VCF files based on rsid using Pysam
vcf python dbSNP
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 760
0
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2
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2.2k
views
Comment: Comment: Getting the intersection of two dbSNP lists
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 760
0
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0
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4.7k
views
Answer: Answer: Need code to filter VCF files based on rsid using Pysam
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 760
0
votes
0
replies
4.7k
views
Comment: Comment: Need code to filter VCF files based on rsid using Pysam
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 760
0
votes
1
reply
4.7k
views
Comment: Comment: Need code to filter VCF files based on rsid using Pysam
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 760
0
votes
1
reply
4.7k
views
Comment: Comment: Need code to filter VCF files based on rsid using Pysam
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 760
0
votes
0
replies
1.9k
views
Annotating human mitogenomes for submission to GenBank; do I need to annotate everything?
sequin genbank annotate
updated 2.8 years ago by 44k • written 10.1 years ago by ▴ 760
0
votes
0
replies
2.1k
views
Using Sequin, how to delete column in alignment
sequin genbank
updated 3.7 years ago by 44k • written 10.1 years ago by ▴ 760
0
votes
2
replies
20k
views
Comment: C: What are good settings for filtering VCF files?
10.2 years ago by devenvyas ▴ 760
37
votes
6
replies
20k
views
What are good settings for filtering VCF files?
samtools vcftools SNP bcftools
updated 2.9 years ago by 44k • written 10.2 years ago by ▴ 760
5
votes
2
replies
3.3k
views
Question about dbSNP rs #s
rs genome dbSNP SNP coordinates
updated 2.9 years ago by 44k • written 10.2 years ago by ▴ 760
216 results • Page 4 of 5
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