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replies
4.0k
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Comment:
C: Automating pre-alignment (and post-alignment) quality control
8.8 years ago by
Chris Miller
22k
1
vote
1
reply
4.0k
views
Comment:
C: Automating pre-alignment (and post-alignment) quality control
8.8 years ago by
Chris Miller
22k
2
votes
0
replies
4.8k
views
Comment:
C: Would a hybrid hard drive (SHDD) improve performance for high IO bioinformatics
8.8 years ago by
Chris Miller
22k
0
votes
0
replies
1.6k
views
Comment:
C: Aligning high depth data to short target sequence
8.8 years ago by
Chris Miller
22k
0
votes
0
replies
2.5k
views
Comment:
Comment: Bioinformatics for Cancer Genomics Workshop
updated 2.3 years ago by
Ram
44k • written 8.8 years ago by
Chris Miller
22k
1
vote
1
reply
3.2k
views
Comment:
C: Mixed opinions on somatic variant calling method
8.8 years ago by
Chris Miller
22k
0
votes
1
reply
4.8k
views
Comment:
C: HiSeq vs GA for RNASeqV2 on TCGA
8.8 years ago by
Chris Miller
22k
2
votes
0
replies
2.7k
views
Comment:
C: Is it correct to merge TCGA mutation data from multiple centers
8.8 years ago by
Chris Miller
22k
1
vote
0
replies
3.7k
views
Comment:
C: Somatic allele frequency from TCGA in non-coding DNA
8.8 years ago by
Chris Miller
22k
1
vote
1
reply
3.7k
views
Comment:
C: Somatic allele frequency from TCGA in non-coding DNA
8.8 years ago by
Chris Miller
22k
0
votes
1
reply
5.1k
views
Answer:
A: Fusion gene detection software
8.9 years ago by
Chris Miller
22k
2
votes
0
replies
2.8k
views
Comment:
C: Did dbSNP not get the memo about hg38 chromosome names?
9.0 years ago by
Chris Miller
22k
0
votes
0
replies
16k
views
Comment:
C: TCGA/Broad Institute CNV Files Segment Mean
9.0 years ago by
Chris Miller
22k
1
vote
0
replies
11k
views
Answer:
A: What are the terms for reference allele and alternate alleles in cancer?
9.0 years ago by
Chris Miller
22k
1
vote
1
reply
2.5k
views
Answer:
A: genome music bmr calc-covg [Run in parallel]
9.0 years ago by
Chris Miller
22k
3
votes
5
replies
4.4k
views
Annotating gene fusion predictions
gene
structural-variant
sv
annotation
fusion
updated 2.3 years ago by
Ram
44k • written 9.1 years ago by
Chris Miller
22k
0
votes
1
reply
4.4k
views
Comment:
C: Annotating gene fusion predictions
9.1 years ago by
Chris Miller
22k
0
votes
0
replies
1.9k
views
Comment:
C: sciClone annotation help
9.1 years ago by
Chris Miller
22k
3
votes
0
replies
2.7k
views
Comment:
C: Can I run VEP on a VCF twice?
9.1 years ago by
Chris Miller
22k
1
vote
3
replies
7.4k
views
Answer:
Answer: Identifying FLT3-ITD with Pindel
updated 2.2 years ago by
Ram
44k • written 9.1 years ago by
Chris Miller
22k
1
vote
2
replies
2.1k
views
Answer:
Answer: JISTIC. Make Probe location file to compare copy number among samples
updated 2.2 years ago by
Ram
44k • written 9.2 years ago by
Chris Miller
22k
1
vote
1
reply
2.6k
views
Answer:
Answer: Effect of Read Length?
updated 2.2 years ago by
Ram
44k • written 9.2 years ago by
Chris Miller
22k
0
votes
0
replies
4.1k
views
Comment:
C: Will Picard MarkDuplicates also un-mark duplicates?
9.2 years ago by
Chris Miller
22k
1
vote
1
reply
3.1k
views
Answer:
Answer: What is a good threshold for calling variants in WES data
updated 23 months ago by
Ram
44k • written 9.4 years ago by
Chris Miller
22k
1
vote
1
reply
1.6k
views
Answer:
A: About Sciclone cluster's color
9.4 years ago by
Chris Miller
22k
1
vote
1
reply
3.0k
views
Comment:
Comment: Efficiently storing methylation data from BS-sequencing
updated 23 months ago by
Ram
44k • written 9.4 years ago by
Chris Miller
22k
3
votes
7
replies
3.0k
views
Efficiently storing methylation data from BS-sequencing
bsseq
bisulfilte-sequencing
methylation
updated 23 months ago by
Ram
44k • written 9.4 years ago by
Chris Miller
22k
0
votes
0
replies
16k
views
Comment:
Comment: TCGA/Broad Institute CNV Files Segment Mean
updated 23 months ago by
Ram
44k • written 9.4 years ago by
Chris Miller
22k
6
votes
0
replies
6.0k
views
Answer:
Answer: Tumor evolution tool for reconstructing a phylogenetic tree
updated 23 months ago by
Ram
44k • written 9.4 years ago by
Chris Miller
22k
0
votes
0
replies
2.6k
views
Comment:
Comment: Suggested Undergraduate Courses to become a Bioinformatician
updated 23 months ago by
Ram
44k • written 9.5 years ago by
Chris Miller
22k
2
votes
1
reply
4.2k
views
Answer:
Answer: CNV data from TCGA
updated 22 months ago by
Ram
44k • written 9.5 years ago by
Chris Miller
22k
4
votes
0
replies
5.3k
views
Answer:
A: Copy Number Variation (CNV) segregation algorithm
9.5 years ago by
Chris Miller
22k
4
votes
0
replies
6.0k
views
Comment:
C: The new era of bioinformatics: simple and fast tools, fewer and more informative
9.5 years ago by
Chris Miller
22k
0
votes
1
reply
3.1k
views
Answer:
Answer: Get Allele Frequency of each SNP in RNASeq
updated 21 months ago by
Ram
44k • written 9.5 years ago by
Chris Miller
22k
8
votes
5
replies
4.7k
views
Exon Array Analysis Tools
gene
microarray
updated 12 months ago by
Ram
44k • written 14.6 years ago by
Chris Miller
22k
2
votes
0
replies
7.5k
views
Comment:
Comment: Optimal design for bioinformatics "lab" space?
updated 2.4 years ago by
Ram
44k • written 9.6 years ago by
Chris Miller
22k
0
votes
0
replies
3.1k
views
Comment:
C: Which Somatic SNP Callers to Benchmark?
9.6 years ago by
Chris Miller
22k
0
votes
2
replies
3.1k
views
Answer:
Answer: Which Somatic SNP Callers to Benchmark?
updated 2.4 years ago by
Ram
44k • written 9.6 years ago by
Chris Miller
22k
1
vote
0
replies
2.0k
views
Answer:
Answer: How to find most common copy number changes in cancer
updated 2.5 years ago by
Ram
44k • written 9.7 years ago by
Chris Miller
22k
0
votes
0
replies
2.2k
views
Answer:
A: Human genome gap file
9.7 years ago by
Chris Miller
22k
0
votes
0
replies
1.3k
views
Answer:
A: How do I interpret the numbers
9.7 years ago by
Chris Miller
22k
3
votes
0
replies
4.7k
views
Answer:
Answer: Recurrent de novo mutation
updated 2.9 years ago by
Ram
44k • written 9.7 years ago by
Chris Miller
22k
2
votes
1
reply
2.6k
views
Answer:
Answer: Why Pash 3.0 has been chosen for Roadmap Epigenome?
updated 2.5 years ago by
Ram
44k • written 9.7 years ago by
Chris Miller
22k
1
vote
1
reply
23k
views
Comment:
Comment: How To Generate A Bibtex File From Pmids
updated 2.5 years ago by
Ram
44k • written 9.7 years ago by
Chris Miller
22k
6
votes
0
replies
8.9k
views
Comment:
C: Notepad and word will not read Fastq or FASTA files
9.7 years ago by
Chris Miller
22k
1
vote
0
replies
5.0k
views
Answer:
Answer: Why a single gene can have multiple locations in chromosome?
updated 2.5 years ago by
Ram
44k • written 9.7 years ago by
Chris Miller
22k
1
vote
0
replies
2.6k
views
Comment:
Comment: Genomic Identification of Significant Targets in Cancer
updated 2.6 years ago by
Ram
44k • written 9.7 years ago by
Chris Miller
22k
2
votes
0
replies
2.5k
views
Answer:
Answer: How to aggregate multiple copy number variation profiles or select the best one
updated 2.6 years ago by
Ram
44k • written 9.8 years ago by
Chris Miller
22k
0
votes
0
replies
4.0k
views
Comment:
Comment: Somaticsniper Hangs Up
updated 2.6 years ago by
Ram
44k • written 9.8 years ago by
Chris Miller
22k
0
votes
0
replies
5.3k
views
Comment:
C: .bam file of human reference genome (hg19)
9.8 years ago by
Chris Miller
22k
1,036 results • Page
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