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Comment:
Comment: Unable to extract cds and exons fasta file from exonerate gff file using exonera
2.1 years ago by
iraun
6.2k
1
vote
1
reply
2.3k
views
Comment:
Comment: Error with STAR
2.1 years ago by
iraun
6.2k
1
vote
0
replies
688
views
Answer:
Answer: parse csv file
2.2 years ago by
iraun
6.2k
0
votes
0
replies
1.2k
views
Answer:
Answer: Redirect Stdout From twoBitToFa in Bash
2.3 years ago by
iraun
6.2k
0
votes
1
reply
1.2k
views
Comment:
Comment: Redirect Stdout From twoBitToFa in Bash
2.3 years ago by
iraun
6.2k
3
votes
0
replies
947
views
Answer:
Answer: bedtools no strand information - fasta file
2.3 years ago by
iraun
6.2k
1
vote
0
replies
1.3k
views
Comment:
Comment: SamSort gatk invalid argument / no space left on disk
2.3 years ago by
iraun
6.2k
1
vote
0
replies
989
views
Comment:
Comment: Doubts about bioprogramming
2.3 years ago by
iraun
6.2k
0
votes
0
replies
634
views
Comment:
Comment: HLA extract
2.3 years ago by
iraun
6.2k
2
votes
0
replies
1.3k
views
Comment:
Comment: How interpret quesition mark symbol strand column in GFF file?
2.4 years ago by
iraun
6.2k
3
votes
0
replies
1.0k
views
Comment:
Comment: genotypes - somatic data
2.4 years ago by
iraun
6.2k
0
votes
1
reply
1.0k
views
Answer:
Answer: VAriant calling in RNASeq
2.4 years ago by
iraun
6.2k
0
votes
1
reply
2.2k
views
Comment:
Comment: How to extract the GT from a given sample in a multisample VCF with cyvcf2?
2.4 years ago by
iraun
6.2k
1
vote
0
replies
1.3k
views
Comment:
Comment: Deleting certain rows of a dataFrame using regular expression and pandas
2.4 years ago by
iraun
6.2k
3
votes
1
reply
1.3k
views
Answer:
Answer: Deleting certain rows of a dataFrame using regular expression and pandas
2.4 years ago by
iraun
6.2k
0
votes
1
reply
1.1k
views
Comment:
Comment: Generating a consensus sequence of a large number of amino acid sequences in pyt
2.4 years ago by
iraun
6.2k
2
votes
0
replies
636
views
Comment:
Comment: Reference doesn't match the input's build in variant calling pipe line
2.4 years ago by
iraun
6.2k
1
vote
0
replies
1.0k
views
Comment:
Comment: Tools for strand direction detection RNA-Seq
2.4 years ago by
iraun
6.2k
3
votes
1
reply
1.0k
views
Comment:
Comment: Tools for strand direction detection RNA-Seq
2.4 years ago by
iraun
6.2k
3
votes
0
replies
1.1k
views
Answer:
Answer: finding the frequency of a motif-matching peptide
2.4 years ago by
iraun
6.2k
0
votes
0
replies
2.3k
views
Comment:
Comment: Which threshold to be put in the MAPQ when doing mpileup of BCF tools on a STAR-
2.4 years ago by
iraun
6.2k
0
votes
1
reply
2.3k
views
Comment:
Comment: Which threshold to be put in the MAPQ when doing mpileup of BCF tools on a STAR-
2.4 years ago by
iraun
6.2k
3
votes
1
reply
1.2k
views
Answer:
Answer: finding overlapping motifs to increase length of motif
2.4 years ago by
iraun
6.2k
1
vote
1
reply
1.7k
views
Comment:
Comment: Aligning reads from mouse samples that express 1 human gene
2.4 years ago by
iraun
6.2k
2
votes
1
reply
887
views
Answer:
Answer: Collapse multifasta file by specific chromosome names
2.4 years ago by
iraun
6.2k
0
votes
1
reply
887
views
Comment:
Comment: Collapse multifasta file by specific chromosome names
2.4 years ago by
iraun
6.2k
0
votes
0
replies
1.4k
views
Comment:
Comment: Motif search in multi fasta file
2.4 years ago by
iraun
6.2k
2
votes
1
reply
1.4k
views
Answer:
Answer: Motof search in multi fasta file
2.4 years ago by
iraun
6.2k
2
votes
1
reply
1.5k
views
Answer:
Answer: Download peptide sequences from NCBI using python
2.4 years ago by
iraun
6.2k
0
votes
0
replies
8.7k
views
Comment:
Comment: Does a PhD or work experience set you up better to do bioinformatics work in ind
2.4 years ago by
iraun
6.2k
0
votes
0
replies
914
views
Comment:
Comment: removing overlaps from a bed file
2.4 years ago by
iraun
6.2k
0
votes
1
reply
8.7k
views
Comment:
Comment: Does a PhD or work experience set you up better to do bioinformatics work in ind
2.4 years ago by
iraun
6.2k
1
vote
1
reply
8.7k
views
Answer:
Answer: Does a PhD or work experience set you up better to do bioinformatics work in ind
2.4 years ago by
iraun
6.2k
1
vote
1
reply
697
views
Answer:
Answer: how to decide the strandness of the RNAseq data
2.4 years ago by
iraun
6.2k
0
votes
0
replies
598
views
Comment:
Comment: How to get Protein names and their ID for a given list of peptide sequence (usin
2.4 years ago by
iraun
6.2k
1
vote
1
reply
2.7k
views
Comment:
Comment: Bioinformatics datasets
2.4 years ago by
iraun
6.2k
0
votes
1
reply
1.5k
views
Comment:
Comment: NAs using org.Hs.eg.db for Ensembl ID to Gene Symbol annotation
2.4 years ago by
iraun
6.2k
0
votes
1
reply
1.6k
views
Comment:
Comment: Conversion of Kegg id to uniprot id
2.4 years ago by
iraun
6.2k
2
votes
1
reply
812
views
Answer:
Answer: What does "super" in reference genome mean??
2.4 years ago by
iraun
6.2k
0
votes
1
reply
847
views
Comment:
Comment: Trouble when installing arb
2.4 years ago by
iraun
6.2k
0
votes
0
replies
637
views
Comment:
Comment: Peptide generation from the identified mutations
2.4 years ago by
iraun
6.2k
4
votes
1
reply
1.4k
views
Comment:
Comment: For loop to go over all files in a folder to execute after qc
2.4 years ago by
iraun
6.2k
2
votes
2
replies
1.4k
views
Answer:
Answer: For loop to go over all files in a folder to execute after qc
2.4 years ago by
iraun
6.2k
0
votes
0
replies
1.1k
views
Comment:
Comment: Would anyone like to send me a simple Biopython tutorials for beginners ? I wil
2.4 years ago by
iraun
6.2k
2
votes
2
replies
1.1k
views
Answer:
Answer: Would anyone like to send me a simple Biopython tutorials for beginners ? I wil
2.4 years ago by
iraun
6.2k
0
votes
1
reply
1.9k
views
Comment:
Comment: how to extract AA sequence for each exons using biomaRt
2.4 years ago by
iraun
6.2k
1
vote
1
reply
855
views
Answer:
Answer: STAR can't genereate genome Index.
2.4 years ago by
iraun
6.2k
1
vote
1
reply
2.5k
views
Comment:
Comment: Filter out Bam not overlapping with Bed File (keeping a read and its mate)?
2.4 years ago by
iraun
6.2k
2
votes
0
replies
857
views
Answer:
Answer: How to extract min and max values of a gene from different columns
2.4 years ago by
iraun
6.2k
1
vote
1
reply
1.5k
views
Comment:
Comment: bwa mem error [mem_sam_pe]
2.4 years ago by
iraun
6.2k
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