Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
0
replies
686
views
Answer: Answer: bcftools error on freebayes vcfs
2.5 years ago by iraun 6.2k
0
votes
0
replies
578
views
Comment: Comment: CNV loss and high expression
2.5 years ago by iraun 6.2k
1
vote
0
replies
1.2k
views
Comment: Comment: Difference between commands [bowtie2, samtools]
2.5 years ago by iraun 6.2k
2
votes
2
replies
1.2k
views
Answer: Answer: Difference between commands [bowtie2, samtools]
2.5 years ago by iraun 6.2k
1
vote
0
replies
2.0k
views
Comment: Comment: For loop in R
2.5 years ago by iraun 6.2k
1
vote
1
reply
3.2k
views
Comment: Comment: building snpEff database
2.6 years ago by iraun 6.2k
2
votes
1
reply
890
views
Answer: Answer: featureCounts results has many psedugenes(ENSG***) together with genes
2.6 years ago by iraun 6.2k
0
votes
1
reply
1.4k
views
Answer: Answer: bcftools consensus overlapped variant
2.6 years ago by iraun 6.2k
1
vote
1
reply
1.4k
views
Comment: Comment: Accessing COSMIC database via Python script
2.6 years ago by iraun 6.2k
1
vote
1
reply
890
views
Comment: Comment: featureCounts results has many psedugenes(ENSG***) together with genes
2.6 years ago by iraun 6.2k
0
votes
2
replies
591
views
Comment: Comment: Extract 3'utr sequences from annotation file
2.6 years ago by iraun 6.2k
0
votes
0
replies
792
views
Comment: Comment: RSEM Prepare Reference - transcriptome instead of genome reference?
2.6 years ago by iraun 6.2k
0
votes
1
reply
792
views
Comment: Comment: RSEM Prepare Reference - transcriptome instead of genome reference?
2.6 years ago by iraun 6.2k
1
vote
0
replies
965
views
Comment: Comment: technical replicates
2.6 years ago by iraun 6.2k
0
votes
1
reply
880
views
Comment: Comment: RNA-seq alignment in UNIX
2.6 years ago by iraun 6.2k
0
votes
1
reply
748
views
Comment: Comment: Addning RNA-seq data to machine learning
2.6 years ago by iraun 6.2k
1
vote
1
reply
1.8k
views
Comment: Comment: Exon-level counts with featureCounts
2.6 years ago by iraun 6.2k
1
vote
1
reply
818
views
Comment: Comment: phasing VCF
2.6 years ago by iraun 6.2k
3
votes
1
reply
882
views
Answer: Answer: How to label genes passing the p-value and fold change cut-offs in EnhancedVolca
2.6 years ago by iraun 6.2k
2
votes
1
reply
1.8k
views
Comment: Comment: DeSeq2 analysis of samples with no replicates?
2.6 years ago by iraun 6.2k
1
vote
2
replies
4.4k
views
Answer: Answer: all variables in design formula must be columns in colData
2.6 years ago by iraun 6.2k
0
votes
0
replies
1.7k
views
Comment: Comment: Retrieve only protein coding esnsemble gene ids and gene symbols
2.6 years ago by iraun 6.2k
1
vote
1
reply
979
views
Comment: Comment: Issue when trying to extract sequences from a genome using bed coordinates and s
2.6 years ago by iraun 6.2k
0
votes
0
replies
1.2k
views
Comment: Comment: extract ALL mapped paired-end reads from BAM file
2.6 years ago by iraun 6.2k
3
votes
1
reply
3.7k
views
Comment: Comment: make a BED file with exons only
2.6 years ago by iraun 6.2k
0
votes
1
reply
979
views
Answer: Answer: Issue when trying to extract sequences from a genome using bed coordinates and s
2.6 years ago by iraun 6.2k
0
votes
1
reply
3.7k
views
Comment: Comment: make a BED file with exons only
2.6 years ago by iraun 6.2k
2
votes
0
replies
501
views
Answer: Answer: Intronic gVCF
2.7 years ago by iraun 6.2k
0
votes
0
replies
2.1k
views
Comment: Comment: Visualization of Frameshift mutations in IGV using Bam files
2.7 years ago by iraun 6.2k
0
votes
0
replies
856
views
Answer: Answer: Tumor cell percentage detection tool
2.7 years ago by iraun 6.2k
0
votes
1
reply
2.1k
views
Comment: Comment: Visualization of Frameshift mutations in IGV using Bam files
2.7 years ago by iraun 6.2k
0
votes
0
replies
802
views
Comment: Comment: Read depth per base DNA seq
2.7 years ago by iraun 6.2k
2
votes
1
reply
2.1k
views
Answer: Answer: Visualization of Frameshift mutations in IGV using Bam files
2.7 years ago by iraun 6.2k
0
votes
0
replies
1.3k
views
Answer: Answer: Why some variants doesn't have RS number?
2.7 years ago by iraun 6.2k
1
vote
0
replies
26k
views
Comment: Comment: Gene Set Enrichment Analysis
2.7 years ago by iraun 6.2k
2
votes
1
reply
2.6k
views
Comment: Comment: htseq-count error
2.7 years ago by iraun 6.2k
0
votes
1
reply
1.1k
views
Comment: Comment: Fasta_reader.pm Trinity fails
2.7 years ago by iraun 6.2k
3
votes
2
replies
2.6k
views
Answer: Answer: htseq-count error
2.7 years ago by iraun 6.2k
0
votes
0
replies
690
views
Comment: Comment: separate meta-population data from VCF
2.7 years ago by iraun 6.2k
2
votes
0
replies
593
views
Answer: Answer: Spades command for single cultivator
2.7 years ago by iraun 6.2k
0
votes
0
replies
809
views
Comment: Comment: What is recurrent somatic copy-number alterations?
2.7 years ago by iraun 6.2k
2
votes
0
replies
4.5k
views
Comment: Comment: DP meaning in VCF files
2.7 years ago by iraun 6.2k
0
votes
0
replies
1.1k
views
Comment: Comment: How exactly count numbers are calculated with tximport
2.7 years ago by iraun 6.2k
0
votes
0
replies
610
views
Comment: Comment: Where to find and extract coordinates of common CNV and repetitive regions in hu
2.7 years ago by iraun 6.2k
0
votes
0
replies
600
views
Comment: Comment: Filtering genes in scRNA-seq
2.7 years ago by iraun 6.2k
0
votes
1
reply
690
views
Comment: Comment: separate meta-population data from VCF
2.7 years ago by iraun 6.2k
0
votes
1
reply
2.2k
views
Answer: Answer: How to perform Allele balance on a VCF file from GATK?
2.7 years ago by iraun 6.2k
1
vote
1
reply
1.8k
views
Comment: Comment: "transcript reads were aligned to the RefSeq transcriptome (downloaded March 201
2.7 years ago by iraun 6.2k
0
votes
0
replies
929
views
Comment: Comment: Bash loop one liner
2.7 years ago by iraun 6.2k
1
vote
1
reply
929
views
Answer: Answer: Bash loop one liner
2.7 years ago by iraun 6.2k
678 results • Page 6 of 14
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6