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0
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Comment: Comment: How to perform Allele balance on a VCF file from GATK?
2.7 years ago by iraun 6.2k
1
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0
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854
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Answer: Answer: command
2.7 years ago by iraun 6.2k
0
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1
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854
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Comment: Comment: command
2.7 years ago by iraun 6.2k
0
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0
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1.6k
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Comment: Comment: Optimize a script that extract features from Fasta file using biopython
2.7 years ago by iraun 6.2k
2
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0
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1.1k
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Comment: Comment: human genome files
2.7 years ago by iraun 6.2k
0
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0
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713
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Comment: Comment: Tutorial for ROC curve analysis using DE RNA data in R
2.7 years ago by iraun 6.2k
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1
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1.1k
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Comment: Comment: human genome files
2.7 years ago by iraun 6.2k
0
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1
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713
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Comment: Comment: Tutorial for ROC curve analysis using DE RNA data in R
2.7 years ago by iraun 6.2k
1
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1
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645
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Comment: Comment: featureCounts low rate and strange output
2.7 years ago by iraun 6.2k
3
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0
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885
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Comment: Comment: Help for PCA analysis
2.7 years ago by iraun 6.2k
0
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0
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1.4k
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Answer: A: Quality check of NGS data
4.4 years ago by iraun 6.2k
0
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0
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1.5k
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Comment: C: Ensembl ID mapping using Biomart
4.4 years ago by iraun 6.2k
1
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0
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803
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Custom gene alleles + Kallisto for proxy Allele-specific expression analysis
kallisto
4.5 years ago by iraun 6.2k
3
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8
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2.4k
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Kallisto: Impact of chosen reference transcriptome on the resulting TPMs
RNA-Seq kallisto
updated 4.6 years ago by 20 • written 4.8 years ago by 6.2k
0
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3
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2.4k
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Comment: C: Kallisto: Impact of chosen reference transcriptome on the resulting TPMs
4.8 years ago by iraun 6.2k
0
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1
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2.4k
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Comment: C: Kallisto: Impact of chosen reference transcriptome on the resulting TPMs
4.8 years ago by iraun 6.2k
0
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1
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3.7k
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Comment: C: Trinity, longest contigs
updated 4.9 years ago by 44k • written 8.8 years ago by 6.2k
0
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1
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3.7k
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Comment: C: Trinity, longest contigs
updated 4.9 years ago by 44k • written 8.8 years ago by 6.2k
1
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1
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3.7k
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Answer: A: Trinity, longest contigs
updated 4.9 years ago by 44k • written 8.8 years ago by 6.2k
1
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0
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1.6k
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Answer: A: unannotated SNP ids
updated 4.9 years ago by 44k • written 8.9 years ago by 6.2k
0
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1
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3.0k
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Answer: A: encode data for RNAseq, type of library
updated 5.0 years ago by 44k • written 8.9 years ago by 6.2k
0
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1
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4.4k
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Comment: C: Filtering for redundancy in transcriptome de novo assembly using CD-HIT EST_fata
updated 5.0 years ago by 44k • written 9.0 years ago by 6.2k
2
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1
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9.3k
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Answer: C: how to quickly extract sequence from genome positions
updated 5.0 years ago by 44k • written 9.0 years ago by 6.2k
0
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0
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6.4k
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Answer: A: How to concatenate gene sequence?
updated 5.0 years ago by 44k • written 9.0 years ago by 6.2k
0
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1
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3.0k
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Comment: C: Trinity : average transcript size check + quality assessment
updated 5.0 years ago by 44k • written 9.0 years ago by 6.2k
0
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1
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3.0k
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Comment: C: Trinity : average transcript size check + quality assessment
updated 5.0 years ago by 44k • written 9.0 years ago by 6.2k
1
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1
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3.0k
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Comment: C: Trinity : average transcript size check + quality assessment
updated 5.0 years ago by 44k • written 9.0 years ago by 6.2k
1
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1
reply
2.8k
views
Comment: C: Finding heterozygous sites in a BAM file
updated 5.0 years ago by 44k • written 9.0 years ago by 6.2k
2
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1
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2.1k
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Answer: A: [Experimental Design] Is it possible to determine completeness of a genome if yo
updated 5.0 years ago by 44k • written 9.0 years ago by 6.2k
4
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1
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12k
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Answer: C: extract columns from file based on header selected from 2nd file
updated 5.0 years ago by 44k • written 9.0 years ago by 6.2k
0
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1
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19k
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Comment: Comment: Using vcfutils.pl command
updated 2.6 years ago by 44k • written 9.8 years ago by 6.2k
0
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2
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8.3k
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Comment: C: Counting number of duplicated reads from fastq file
updated 5.1 years ago by 44k • written 9.8 years ago by 6.2k
0
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0
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8.3k
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Comment: C: Counting number of duplicated reads from fastq file
updated 5.1 years ago by 44k • written 9.8 years ago by 6.2k
0
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0
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2.0k
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Answer: A: SNP annotation in sequence
updated 5.1 years ago by 44k • written 9.9 years ago by 6.2k
2
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0
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3.2k
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Answer: Answer: Taxonomic assignments to metagenomic sequences
updated 2.7 years ago by 44k • written 9.9 years ago by 6.2k
3
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2
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4.8k
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Answer: Answer: tophat --library-type option
updated 2.7 years ago by 44k • written 9.9 years ago by 6.2k
11
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0
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15k
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Answer: Answer: Beginner for SnpEff
updated 2.7 years ago by 44k • written 9.9 years ago by 6.2k
1
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0
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3.7k
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Comment: C: Pindel too slow. How to speedup
updated 5.1 years ago by 44k • written 10.1 years ago by 6.2k
0
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1
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9.5k
views
Comment: C: How to check the bam file of read quality with graphically visual?
updated 5.1 years ago by 44k • written 10.1 years ago by 6.2k
1
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1
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9.5k
views
Comment: C: How to check the bam file of read quality with graphically visual?
updated 5.1 years ago by 44k • written 10.1 years ago by 6.2k
3
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1
reply
2.1k
views
Answer: A: Estimation of carrier of Mendelian disorders.
updated 5.1 years ago by 44k • written 10.1 years ago by 6.2k
3
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1
reply
2.1k
views
Answer: A: How to analyze non-Human whole genome re-sequencing data?
updated 5.1 years ago by 44k • written 10.1 years ago by 6.2k
1
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0
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13k
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Answer: A: Filter genotype in multi-sample VCF file
updated 5.1 years ago by 44k • written 10.1 years ago by 6.2k
0
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0
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6.9k
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Comment: Comment: Is illumina small RNA-Seq strand specific?
updated 2.8 years ago by 44k • written 10.1 years ago by 6.2k
3
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1
reply
4.1k
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Comment: C: Trinity de novo transcript assembly too many transcripts
updated 5.7 years ago by 44k • written 9.5 years ago by 6.2k
3
votes
2
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40k
views
Answer: A: how to remove multiallelic from VCF
updated 5.8 years ago by 44k • written 9.6 years ago by 6.2k
0
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1
reply
3.2k
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Answer: A: Aligning reads to genome together with transcriptome
updated 6.2 years ago by 44k • written 8.8 years ago by 6.2k
2
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1
reply
2.4k
views
Answer: A: please help me to be clear about the up and down regulated genes from cuffdiff
updated 6.2 years ago by 44k • written 8.8 years ago by 6.2k
1
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0
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5.3k
views
Answer: A: RNA seq results as fpkm
updated 6.2 years ago by 44k • written 8.8 years ago by 6.2k
0
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0
replies
6.1k
views
Comment: C: GFF3 to GTF
updated 6.2 years ago by 44k • written 8.8 years ago by 6.2k
678 results • Page 7 of 14
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