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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
12 months ago by Vasu ▴ 790
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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
12 months ago by Vasu ▴ 790
0
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1
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1.7k
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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
12 months ago by Vasu ▴ 790
0
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1
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1.7k
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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
12 months ago by Vasu ▴ 790
0
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0
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1.7k
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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
12 months ago by Vasu ▴ 790
0
votes
2
replies
1.7k
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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
12 months ago by Vasu ▴ 790
3
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14
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1.7k
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How to extract specific region from multiple bam files and merge the outputs into single bam?
bam rna-seq
updated 12 months ago by 147k • written 12 months ago by ▴ 790
0
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1
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1.8k
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Comment: Comment: How to remove uncharacterized chromosomes from GTF file?
22 months ago by Vasu ▴ 790
3
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3
replies
1.8k
views
How to remove uncharacterized chromosomes from GTF file?
grep gtf awk
updated 22 months ago by 11k • written 22 months ago by ▴ 790
2
votes
8
replies
1.8k
views
How to subset a gtf based on names in the third column of another file in a single command?
grep rnaseq awk
updated 2.2 years ago by 147k • written 2.2 years ago by ▴ 790
0
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0
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1.8k
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Comment: Comment: How to subset a gtf based on names in the third column of another file in a sing
2.2 years ago by Vasu ▴ 790
0
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0
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1.8k
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Comment: Comment: How to subset a gtf based on names in the third column of another file in a sing
2.2 years ago by Vasu ▴ 790
0
votes
0
replies
1.8k
views
Comment: Comment: How to subset a gtf based on names in the third column of another file in a sing
2.2 years ago by Vasu ▴ 790
0
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0
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911
views
Comment: Comment: How to read fastqs from different sequencing runs rather than merging?
2.6 years ago by Vasu ▴ 790
1
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4
replies
911
views
How to read fastqs from different sequencing runs rather than merging?
ngs rnaseq fastq
updated 2.6 years ago by ★ 6.9k • written 2.6 years ago by ▴ 790
14
votes
12
replies
15k
views
7 follow
Gene set enrichment analysis with logFC and PValue
RNA-Seq gsea r gene expression genesetenrichment
updated 3.8 years ago by ▴ 130 • written 6.1 years ago by ▴ 790
19
votes
5
replies
20k
views
6 follow
showing specific GO pathways in the dotplot or cnetplot
RNA-Seq R clusterprofiler dotplot goenrichment
updated 3.6 years ago by ▴ 10 • written 5.8 years ago by ▴ 790
2
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0
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1.6k
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Answer: A: Gene Ontology using clusterProfiler
4.5 years ago by Vasu ▴ 790
1
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0
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1.8k
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Answer: A: Pathway/Gene set z-score from log2FC
4.5 years ago by Vasu ▴ 790
0
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1
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2.3k
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Comment: C: RNA seq data analysis and building co expression network
4.5 years ago by Vasu ▴ 790
0
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1
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2.9k
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Comment: C: Question about WGCNA Module Eigengenes to Pathway analysis
4.5 years ago by Vasu ▴ 790
0
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0
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2.9k
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Comment: C: Question about WGCNA Module Eigengenes to Pathway analysis
4.5 years ago by Vasu ▴ 790
0
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1
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2.9k
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Comment: C: Question about WGCNA Module Eigengenes to Pathway analysis
4.5 years ago by Vasu ▴ 790
5
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6
replies
2.9k
views
Question about WGCNA Module Eigengenes to Pathway analysis
RNA-Seq wgcna geneexpression coexpressionnetwork
updated 4.5 years ago by 3.8k • written 4.5 years ago by ▴ 790
1
vote
1
reply
1.0k
views
Identification of transcription factor - gene regulation information
RNA-Seq tcga transcription factor
updated 4.9 years ago by 20 • written 5.5 years ago by ▴ 790
0
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0
replies
1.5k
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Comment: C: Different miRNAs with same miRNA regions in TCGA
5.1 years ago by Vasu ▴ 790
0
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1
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1.5k
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Comment: C: Different miRNAs with same miRNA regions in TCGA
5.1 years ago by Vasu ▴ 790
1
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4
replies
1.5k
views
Different miRNAs with same miRNA regions in TCGA
tcga mirna mirtarbase mirnaseq
5.1 years ago by Vasu ▴ 790
0
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1
reply
1.7k
views
Comment: C: Question about Isoform expression (miRNA) data from TCGA
5.1 years ago by Vasu ▴ 790
8
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3
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1.7k
views
Question about Isoform expression (miRNA) data from TCGA
mirna mirnaseq mirbase mirtarbase tcga
updated 5.1 years ago by 20k • written 5.1 years ago by ▴ 790
2
votes
0
replies
2.4k
views
Comment: C: Question about miRNA nomenclature
5.2 years ago by Vasu ▴ 790
0
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1
reply
2.4k
views
Comment: C: Question about miRNA nomenclature
5.2 years ago by Vasu ▴ 790
0
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0
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2.4k
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Comment: C: Question about miRNA nomenclature
5.2 years ago by Vasu ▴ 790
0
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1
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2.4k
views
Comment: C: Question about miRNA nomenclature
5.2 years ago by Vasu ▴ 790
17
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8
replies
2.4k
views
Question about miRNA nomenclature
mirna mirnaseq mirbase
updated 2.8 years ago by 20k • written 5.2 years ago by ▴ 790
3
votes
1
reply
9.2k
views
Ensembl id to GeneSymbol with biomart
biomart
updated 5.4 years ago by 20 • written 7.2 years ago by ▴ 790
1
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0
replies
1.4k
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Comment: C: Question about chromosomal instability
5.6 years ago by Vasu ▴ 790
0
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1
reply
1.4k
views
Comment: C: Question about chromosomal instability
5.6 years ago by Vasu ▴ 790
0
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1
reply
1.4k
views
Comment: C: Question about chromosomal instability
5.6 years ago by Vasu ▴ 790
0
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0
replies
2.3k
views
Comment: C: Question about differentially expressed genes selection for low sample size data
5.6 years ago by Vasu ▴ 790
0
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1
reply
2.3k
views
Comment: C: Question about differentially expressed genes selection for low sample size data
5.6 years ago by Vasu ▴ 790
0
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1
reply
2.3k
views
Comment: C: Question about differentially expressed genes selection for low sample size data
5.6 years ago by Vasu ▴ 790
11
votes
10
replies
2.3k
views
Question about differentially expressed genes selection for low sample size data
RNA-Seq R geneexpression edger pvalue
updated 5.6 years ago by ★ 1.3k • written 5.6 years ago by ▴ 790
3
votes
6
replies
1.4k
views
Question about chromosomal instability
copy number chromosome gene R genome
updated 5.6 years ago by 88k • written 5.6 years ago by ▴ 790
34
votes
35
replies
18k
views
8 follow
Sample names for TCGA data from GDC-legacy archive
RNA-Seq tcga gdc
updated 5.7 years ago by ▴ 30 • written 6.7 years ago by ▴ 790
0
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1
reply
2.2k
views
Comment: C: Question about ClinicalData discrepancies b/w cbioportal data and GDC data?
5.7 years ago by Vasu ▴ 790
0
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1
reply
2.2k
views
Comment: C: Question about ClinicalData discrepancies b/w cbioportal data and GDC data?
5.7 years ago by Vasu ▴ 790
0
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1
reply
2.2k
views
Comment: C: Question about ClinicalData discrepancies b/w cbioportal data and GDC data?
5.7 years ago by Vasu ▴ 790
2
votes
7
replies
2.2k
views
Question about ClinicalData discrepancies b/w cbioportal data and GDC data?
survival gdc cbioportal tcga clinicaldata
5.7 years ago by Vasu ▴ 790
3
votes
0
replies
3.2k
views
Comment: C: Error with merge_result with dataframes using clusterprofiler
5.8 years ago by Vasu ▴ 790
296 results • Page 1 of 6
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