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6.6k
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Answer: A: Gene ontology and KEGG pathway analysis of rice RNA-seq data
7.2 years ago by EagleEye 7.6k
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3.1k
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Answer: A: Generating cluster heat map
7.2 years ago by EagleEye 7.6k
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0
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3.4k
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Answer: A: Time course experiment in RNASeq
7.2 years ago by EagleEye 7.6k
1
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0
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2.0k
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Comment: C: Perfoming functional enrichment of DEGS
7.2 years ago by EagleEye 7.6k
1
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1
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15k
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Answer: A: Visualization of Gene Ontology using bubble plot.
7.2 years ago by EagleEye 7.6k
2
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0
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3.7k
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Answer: A: The web page at ftp://ftp-trace.ncbi.nlm.nih.gov/sra/sra-instant/reads/ByExp/sra
7.2 years ago by EagleEye 7.6k
6
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0
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4.3k
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Answer: A: How to get Kegg pathway names from kegg pathway IDs
7.2 years ago by EagleEye 7.6k
2
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0
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3.8k
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Answer: A: hisat2 library type
7.2 years ago by EagleEye 7.6k
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4.4k
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Comment: C: Many Differentially expressed genes but few GO terms
7.2 years ago by EagleEye 7.6k
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0
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5.0k
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Comment: C: GeneSCF (Gene Enrichment Tool): Advice to users
7.2 years ago by EagleEye 7.6k
0
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0
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1.2k
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Answer: A: RNA-Protein interaction motifs?
7.2 years ago by EagleEye 7.6k
1
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0
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5.5k
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Answer: A: Doing GSEA analysis on a set of genes
7.2 years ago by EagleEye 7.6k
0
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0
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3.7k
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Answer: A: Get pathway information from KEGG using Entry id
7.3 years ago by EagleEye 7.6k
0
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0
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2.1k
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Answer: A: COSMIC-like database for mouse sequencing data
7.3 years ago by EagleEye 7.6k
0
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0
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3.3k
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Comment: C: running DESEQ2 results in GSEA
7.3 years ago by EagleEye 7.6k
0
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0
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4.0k
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Answer: A: How to extract gene names for a metabolic pathway from KEGG?
7.3 years ago by EagleEye 7.6k
1
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1
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4.9k
views
Comment: C: StringTie "missing header error" [for both HISAT2 and STAR alignment files]
7.3 years ago by EagleEye 7.6k
5
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3
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4.9k
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StringTie "missing header error" [for both HISAT2 and STAR alignment files]
stringtie RNA-Seq alignment
updated 19 months ago by 44k • written 7.3 years ago by 7.6k
1
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0
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2.8k
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Comment: C: Hypergeometric test - Defining the gene universe
7.4 years ago by EagleEye 7.6k
2
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0
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3.7k
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Answer: A: number of genes in human genome
7.4 years ago by EagleEye 7.6k
1
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0
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1.5k
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Answer: A: enrichment analysis tools
7.4 years ago by EagleEye 7.6k
0
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0
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1.8k
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Comment: C: Prediction of RNA binding regions in protein
7.4 years ago by EagleEye 7.6k
0
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2
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1.8k
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Prediction of RNA binding regions in protein
protein docking modeling simulation
7.4 years ago by EagleEye 7.6k
2
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1
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4.5k
views
Answer: A: Enrichment analysis: Which tool I should trust?
7.4 years ago by EagleEye 7.6k
0
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1
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53k
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Comment: C: Gene Set Clustering based on Functional annotation (GeneSCF)
7.4 years ago by EagleEye 7.6k
2
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1
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2.1k
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Answer: C: code for text file parsing
7.4 years ago by EagleEye 7.6k
0
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2
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53k
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Comment: C: Gene Set Clustering based on Functional annotation (GeneSCF)
7.4 years ago by EagleEye 7.6k
1
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0
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4.5k
views
Comment: C: Enrichment analysis: Which tool I should trust?
7.4 years ago by EagleEye 7.6k
1
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0
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11k
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Comment: C: Computing TPM from normalized read count from DESEQ
7.4 years ago by EagleEye 7.6k
1
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0
replies
11k
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Comment: C: How to calculate RPKM from featureCounts output
7.4 years ago by EagleEye 7.6k
0
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1
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11k
views
Comment: C: Computing TPM from normalized read count from DESEQ
7.4 years ago by EagleEye 7.6k
0
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1
reply
11k
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Comment: C: How to calculate RPKM from featureCounts output
7.4 years ago by EagleEye 7.6k
0
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1
reply
11k
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Comment: C: How to calculate RPKM from featureCounts output
7.4 years ago by EagleEye 7.6k
0
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1
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11k
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Comment: C: How to calculate RPKM from featureCounts output
7.4 years ago by EagleEye 7.6k
0
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1
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2.6k
views
Answer: A: Looking for small RNA-seq in single cell
7.4 years ago by EagleEye 7.6k
0
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0
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3.6k
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Comment: C: Tool to analysis GO term enrichment in C. elegans
7.4 years ago by EagleEye 7.6k
2
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2
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3.6k
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Answer: A: Tool to analysis GO term enrichment in C. elegans
7.4 years ago by EagleEye 7.6k
0
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0
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4.0k
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Comment: C: calculate RPKM from read count and gff by galaxy
7.5 years ago by EagleEye 7.6k
0
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1
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4.0k
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Answer: A: calculate RPKM from read count and gff by galaxy
7.5 years ago by EagleEye 7.6k
0
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0
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4.7k
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Answer: A: Up-regulated and down-regulated genes in pathway analysis
7.5 years ago by EagleEye 7.6k
0
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0
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11k
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Answer: A: Automating Gorilla And/Or Revigo Analysis
7.5 years ago by EagleEye 7.6k
1
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1
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12k
views
Comment: C: TPM to logFC and pvalues
7.5 years ago by EagleEye 7.6k
2
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0
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2.4k
views
Answer: A: GeneSCF and P-value Benjamini and Hochberg (FDR)
7.5 years ago by EagleEye 7.6k
1
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1
reply
5.0k
views
Comment: C: Is there a way to calculate p-values, FDR or t test starting from logFC data?
7.5 years ago by EagleEye 7.6k
1
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1
reply
2.9k
views
Comment: C: Problems getting read number per gene after sequencing
7.5 years ago by EagleEye 7.6k
0
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1
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12k
views
Comment: C: TPM to logFC and pvalues
7.5 years ago by EagleEye 7.6k
1
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0
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24k
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Comment: C: Why am I getting different ensembl gene ids for a given gene symbol?
7.5 years ago by EagleEye 7.6k
1
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0
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19k
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Comment: C: how to view. Rdata files in R
7.5 years ago by EagleEye 7.6k
1
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0
replies
5.2k
views
Answer: A: Enrichment Analysis from DESeq2 data
7.5 years ago by EagleEye 7.6k
0
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0
replies
12k
views
Comment: C: TPM to logFC and pvalues
7.5 years ago by EagleEye 7.6k
974 results • Page 6 of 20
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