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Comment: C: How do I interpret the adapter output from FastQC?
9.8 years ago by Endre Bakken Stovner ▴ 970
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2.9k
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How do I interpret the adapter output from FastQC?
FastQC
updated 2.7 years ago by 45k • written 9.8 years ago by ▴ 970
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11k
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Comment: C: How do I compute the effective genome size?
9.8 years ago by Endre Bakken Stovner ▴ 970
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11k
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Comment: Comment: How do I compute the effective genome size?
updated 2.7 years ago by 45k • written 9.8 years ago by ▴ 970
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0
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11k
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Comment: C: How do I compute the effective genome size?
9.8 years ago by Endre Bakken Stovner ▴ 970
0
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0
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11k
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Comment: C: How do I compute the effective genome size?
9.8 years ago by Endre Bakken Stovner ▴ 970
0
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1
reply
11k
views
Comment: C: How do I compute the effective genome size?
9.8 years ago by Endre Bakken Stovner ▴ 970
2
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0
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45k
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Comment: C: Will Python Take The Place Of R?
9.8 years ago by Endre Bakken Stovner ▴ 970
12
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4
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2.3k
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What are the benefits and risks of releasing my very beta software with a short preprint?
preprint
updated 2.7 years ago by 45k • written 9.8 years ago by ▴ 970
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1
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2.3k
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Comment: C: What are the benefits and risks of releasing my very beta software with a short
9.8 years ago by Endre Bakken Stovner ▴ 970
7
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5
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5.1k
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Tool: goverlap: modern ontology term enrichment analyzer (DAVID/GOstats for the command line)
term-enrichment
updated 2.7 years ago by 45k • written 9.8 years ago by ▴ 970
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1
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5.1k
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Comment: Comment: goverlap: modern ontology term enrichment analyzer (DAVID/GOstats for the comman
updated 2.7 years ago by 45k • written 9.8 years ago by ▴ 970
5
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0
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4.2k
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Tool: Annotation maps for Gene Ontology in Python: godb
gene-ontology Python
updated 2.7 years ago by 45k • written 9.8 years ago by ▴ 970
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1
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5.9k
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Answer: Answer: Mapping refseq transcripts to encoded proteins (NM_ to NP_)
updated 2.7 years ago by 45k • written 9.9 years ago by ▴ 970
2
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0
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3.4k
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Answer: Answer: R's GO.db and Python's go_db gives different ancestors, which is correct?
updated 2.7 years ago by 45k • written 9.8 years ago by ▴ 970
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7.5k
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Comment: Comment: Perl6 and the Future of Bioinformatics - Compatibility and Integration
updated 2.7 years ago by 45k • written 9.8 years ago by ▴ 970
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0
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4.0k
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Answer: Answer: biomartian enables querying BioMart from the command line - now all Python!
updated 2.7 years ago by 45k • written 9.8 years ago by ▴ 970
12
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5
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4.0k
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Tool: biomartian enables querying BioMart from the command line - now all Python!
biomart
updated 2.7 years ago by 45k • written 9.9 years ago by ▴ 970
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0
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14k
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Comment: Comment: Flip Gwas Data To Positive Strand (Hg19 Build 37)
updated 2.7 years ago by 45k • written 9.8 years ago by ▴ 970
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0
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22k
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Answer: Answer: How To Find The Pathways In Which A Given Gene Or Protein Is Involved？
updated 2.7 years ago by 45k • written 9.9 years ago by ▴ 970
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1
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14k
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Comment: C: Flip Gwas Data To Positive Strand (Hg19 Build 37)
9.8 years ago by Endre Bakken Stovner ▴ 970
2
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0
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5.4k
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Comment: Comment: Asking for opinions about Bioinformatics Data Skills book
updated 2.7 years ago by 45k • written 9.9 years ago by ▴ 970
4
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2
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5.4k
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Answer: Answer: Asking for opinions about Bioinformatics Data Skills book
updated 2.7 years ago by 45k • written 9.9 years ago by ▴ 970
0
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1
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5.4k
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Comment: C: Asking for opinions about Bioinformatics Data Skills book
9.9 years ago by Endre Bakken Stovner ▴ 970
0
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1
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4.7k
views
Comment: Comment: Turning GO Terms to GO IDs
updated 2.7 years ago by 45k • written 9.9 years ago by ▴ 970
1
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1
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4.7k
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Comment: C: Turning GO Terms to GO IDs
9.9 years ago by Endre Bakken Stovner ▴ 970
5
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8
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5.9k
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Mapping refseq transcripts to encoded proteins (NM_ to NP_)
refseq
updated 2.7 years ago by 45k • written 10.8 years ago by ▴ 970
0
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0
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4.0k
views
Comment: Comment: biomartian enables querying BioMart from the command line - now all Python!
updated 2.7 years ago by 45k • written 9.9 years ago by ▴ 970
0
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1
reply
4.0k
views
Comment: Comment: biomartian enables querying BioMart from the command line - now all Python!
updated 2.7 years ago by 45k • written 9.9 years ago by ▴ 970
3
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3
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3.5k
views
Iterate over go terms in go hierachies "BP", "MF", "CC"
gene-ontology go
updated 2.4 years ago by 45k • written 10.1 years ago by ▴ 970
0
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1
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4.0k
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Comment: Comment: biomartian enables querying BioMart from the command line - now all Python!
updated 2.7 years ago by 45k • written 9.9 years ago by ▴ 970
1
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1
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3.9k
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Comment: C: Formatting genotype matrix for imputation
9.9 years ago by Endre Bakken Stovner ▴ 970
3
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1
reply
3.9k
views
Answer: Answer: Formatting genotype matrix for imputation
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 970
1
vote
1
reply
4.8k
views
Tool: snpflip finds reverse and ambiguous strand SNPs
SNP strand
updated 2.6 years ago by 45k • written 9.9 years ago by ▴ 970
1
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0
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2.6k
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Comment: Comment: Looking for Jewish Exomes
updated 2.5 years ago by 45k • written 9.9 years ago by ▴ 970
5
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0
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1.9k
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Tool: New Python/R interface in pre-alpha: wide diapeR
R Python
updated 24 months ago by 45k • written 10.0 years ago by ▴ 970
0
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2
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31k
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Comment: C: Extract Sequence From Fasta File Using Ids From A Separate File
10.0 years ago by Endre Bakken Stovner ▴ 970
3
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3
replies
2.5k
views
GO.db: why does GOCCCHILDREN$"GO:0005575" work, but not GOCCCHILDREN$go when go="GO:0005575"
r GO.db
updated 2.5 years ago by 45k • written 10.0 years ago by ▴ 970
2
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0
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3.5k
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Answer: Answer: Iterate over go terms in go hierachies "BP", "MF", "CC"
updated 2.4 years ago by 45k • written 10.1 years ago by ▴ 970
0
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0
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3.5k
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Comment: C: Iterate over go terms in go hierachies "BP", "MF", "CC"
10.1 years ago by Endre Bakken Stovner ▴ 970
0
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0
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2.2k
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Comment: C: Terminology: for genomes you call allels, but on the epigenome you call ____?
10.1 years ago by Endre Bakken Stovner ▴ 970
8
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9
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2.2k
views
Terminology: for genomes you call allels, but on the epigenome you call ____?
epigenetics
updated 2.4 years ago by 45k • written 10.1 years ago by ▴ 970
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0
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2.2k
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Comment: Comment: Terminology: for genomes you call allels, but on the epigenome you call ____?
updated 2.4 years ago by 45k • written 10.1 years ago by ▴ 970
0
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1
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2.2k
views
Comment: Comment: Terminology: for genomes you call allels, but on the epigenome you call ____?
updated 2.4 years ago by 45k • written 10.1 years ago by ▴ 970
0
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0
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2.2k
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Comment: C: Terminology: you call a genome, but _____ an epigenome?
10.1 years ago by Endre Bakken Stovner ▴ 970
0
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0
replies
2.6k
views
Comment: Comment: Different filter settings to different files in same run of samtools
updated 3.0 years ago by 45k • written 10.2 years ago by ▴ 970
0
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1
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3.5k
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Comment: C: Bam-files: How to know which reads are actual pairs?
10.2 years ago by Endre Bakken Stovner ▴ 970
0
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0
replies
2.6k
views
Comment: Comment: Different filter settings to different files in same run of samtools
updated 3.0 years ago by 45k • written 10.2 years ago by ▴ 970
0
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1
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3.5k
views
Comment: C: Bam-files: How to know which reads are actual pairs?
10.2 years ago by Endre Bakken Stovner ▴ 970
0
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0
replies
2.6k
views
Comment: C: Different filter settings to different files in same run of samtools
10.2 years ago by Endre Bakken Stovner ▴ 970
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