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comments
0
votes
1
reply
5.1k
views
Comment:
Comment: genotype imputation pipeline
3.3 years ago by
seta
★ 1.9k
0
votes
1
reply
1.4k
views
Comment:
Comment: Considering the multiple test correction for the analysis of polygenic risk scor
3.3 years ago by
seta
★ 1.9k
0
votes
1
reply
1.4k
views
Comment:
Comment: Considering the multiple test correction for the analysis of polygenic risk scor
3.3 years ago by
seta
★ 1.9k
0
votes
5
replies
1.4k
views
Considering the multiple test correction for the analysis of polygenic risk score association
association
allele
polygenic
score
Bonferroni
updated 3.3 years ago by
German.M.Demidov
★ 2.9k • written 3.3 years ago by
seta
★ 1.9k
1
vote
1
reply
903
views
Network construction and analysis using WGCNA
meta-analysis
WGCNA
updated 3.3 years ago by
andres.firrincieli
3.8k • written 3.3 years ago by
seta
★ 1.9k
0
votes
0
replies
2.2k
views
Comment:
Comment: Visualizing the gene network obtained by WGCNA
3.4 years ago by
seta
★ 1.9k
0
votes
1
reply
2.2k
views
Comment:
Comment: Visualizing the gene network obtained by WGCNA
3.4 years ago by
seta
★ 1.9k
2
votes
5
replies
2.2k
views
Visualizing the gene network obtained by WGCNA
WGCNA
weighted
network
visualizing
3.4 years ago by
seta
★ 1.9k
0
votes
2
replies
794
views
Comparing two highly similar genomes
genome
alignment
updated 17 months ago by
Ram
44k • written 3.4 years ago by
seta
★ 1.9k
0
votes
0
replies
905
views
Comment:
Comment: Text mining tool
3.5 years ago by
seta
★ 1.9k
0
votes
2
replies
905
views
Any text mining tool?
text-mining
meta-analysis
3.5 years ago by
seta
★ 1.9k
0
votes
1
reply
3.1k
views
Regarding valid transcript and Transdecoder output
sequencing
Transdecoder
transcript
assembly
updated 3.7 years ago by
ponganta
▴ 590 • written 8.6 years ago by
seta
★ 1.9k
0
votes
0
replies
912
views
Comment:
C: How to interpret Site Frequency Spectrum? (SFS, allele frequency spectrum)
3.8 years ago by
seta
★ 1.9k
0
votes
0
replies
8.4k
views
Comment:
C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
3.8 years ago by
seta
★ 1.9k
0
votes
0
replies
2.0k
views
Comment:
C: RNA-seq power estimation using ssizeRNA program
3.8 years ago by
seta
★ 1.9k
5
votes
7
replies
2.0k
views
RNA-seq power estimation using ssizeRNA program
power analysis
RNA-seq
ssizeRNA
updated 3.8 years ago by
Kevin Blighe
88k • written 3.8 years ago by
seta
★ 1.9k
0
votes
1
reply
2.0k
views
Comment:
C: RNA-seq power estimation using ssizeRNA program
3.8 years ago by
seta
★ 1.9k
10
votes
8
replies
11k
views
10 follow
How to extract fasta sequences from assembled transcripts generated by Stringtie
fasta
gtf
stringtie
updated 20 months ago by
Ram
44k • written 7.6 years ago by
seta
★ 1.9k
0
votes
0
replies
815
views
The same effect of SNPs in LD?
GWAS
linkage disequilibrium
effect size
4.0 years ago by
seta
★ 1.9k
0
votes
0
replies
1.2k
views
PLINK beta coefficient
GWAS
association
beta coefficient
PLINK
4.0 years ago by
seta
★ 1.9k
1
vote
0
replies
1.1k
views
Linear mixed model for genome-wide association analysis
linear mixed model
GWAS
GCTA
updated 4.1 years ago by
Biostar
20 • written 4.2 years ago by
seta
★ 1.9k
2
votes
0
replies
1.7k
views
Comment:
C: PLINK basic command line usage
4.1 years ago by
seta
★ 1.9k
0
votes
0
replies
7.1k
views
Comment:
C: WGCNA soft-threshold power selection
4.1 years ago by
seta
★ 1.9k
0
votes
0
replies
1.7k
views
Comment:
C: GWAS results and linkage disequilibrium issue
4.1 years ago by
seta
★ 1.9k
0
votes
2
replies
1.7k
views
GWAS results and linkage disequilibrium issue
GWAS
linkage disequilibrium
LD
risk score
4.2 years ago by
seta
★ 1.9k
0
votes
1
reply
1.1k
views
Comment:
C: real time pcr primer design
4.2 years ago by
seta
★ 1.9k
0
votes
0
replies
1.4k
views
Comment:
C: edgeR normalization via TMM method
4.2 years ago by
seta
★ 1.9k
2
votes
2
replies
1.4k
views
edgeR normalization via TMM method
RNA-Seq
edgeR normalization
TMM
updated 4.2 years ago by
ATpoint
85k • written 4.2 years ago by
seta
★ 1.9k
0
votes
1
reply
8.5k
views
Comment:
C: Why 'filterByExpr' does not eliminate low read counts from the expression data?
4.2 years ago by
seta
★ 1.9k
5
votes
23
replies
2.9k
views
Please help with connecting the part of the header in a fasta file with another text file
programming
fasta
updated 20 months ago by
Ram
44k • written 8.4 years ago by
seta
★ 1.9k
27
votes
44
replies
16k
views
How to remove contamination from the transcriptome assembly
RNA-Seq
contamination
assembly
blast
Hiseq reads
updated 2.3 years ago by
Ram
44k • written 9.1 years ago by
seta
★ 1.9k
0
votes
1
reply
2.0k
views
Comment:
C: Please help about java error of BBDuk
4.2 years ago by
seta
★ 1.9k
0
votes
5
replies
2.0k
views
Please help about java error of BBDuk
bbmap
bbduk
java
brian bushnel
updated 3.7 years ago by
GenoMax
147k • written 4.2 years ago by
seta
★ 1.9k
0
votes
1
reply
2.3k
views
Comment:
C: Strange, FastQC doesn't work on windows, any suggestions?
4.2 years ago by
seta
★ 1.9k
0
votes
0
replies
2.3k
views
Comment:
C: Strange, FastQC doesn't work on windows, any suggestions?
4.2 years ago by
seta
★ 1.9k
0
votes
5
replies
2.3k
views
Strange, FastQC doesn't work on windows, any suggestions?
Fastqc
NGS
4.2 years ago by
seta
★ 1.9k
0
votes
6
replies
1.8k
views
Microarray data normalization
RMA
microarray
normalization
updated 3.3 years ago by
parinv
▴ 80 • written 4.3 years ago by
seta
★ 1.9k
0
votes
2
replies
950
views
Linear mixed model and GWAS analysis
gwas
linear mixed model
longitudinal
cohort
4.4 years ago by
seta
★ 1.9k
0
votes
1
reply
950
views
Comment:
C: GWAS analysis using linear mixed model
4.4 years ago by
seta
★ 1.9k
0
votes
0
replies
5.3k
views
Comment:
C: Phenotype from plink fam file in gcta
4.4 years ago by
seta
★ 1.9k
0
votes
0
replies
638
views
Physical interaction of long non-coding RNAs with target genes
target genes
physical interaction
lncRNA
4.4 years ago by
seta
★ 1.9k
0
votes
0
replies
854
views
Comment:
C: Validation of protein-coding gene and lncRNA correlation
4.5 years ago by
seta
★ 1.9k
0
votes
2
replies
854
views
Validation of protein-coding gene and lncRNA correlation
RNA-Seq
correlation
non-coding RNA
lncRNA
updated 4.5 years ago by
caggtaagtat
★ 1.9k • written 4.5 years ago by
seta
★ 1.9k
0
votes
0
replies
611
views
The gene expression effect of eQTL variants in high LD
eQTL variants
GTEx database
gene expression effect
updated 4.5 years ago by
Biostar
20 • written 4.6 years ago by
seta
★ 1.9k
4
votes
5
replies
8.0k
views
Read trimming with BBDuk
bbduk
read trimming
bbmap
updated 4.5 years ago by
Biostar
20 • written 7.6 years ago by
seta
★ 1.9k
2
votes
2
replies
801
views
Classification of long non-coding RNAs
lncRNA
non-coding RNA
updated 4.5 years ago by
GenoMax
147k • written 4.5 years ago by
seta
★ 1.9k
0
votes
0
replies
1.2k
views
Comment:
C: long-non coding RNA and protein-coding genes correlation
4.5 years ago by
seta
★ 1.9k
0
votes
2
replies
1.2k
views
long-non coding RNA and protein-coding genes correlation
lncRNA
RNA-seq
correlation
co-expression
updated 4.5 years ago by
Carlo Yague
8.9k • written 4.5 years ago by
seta
★ 1.9k
1
vote
1
reply
1.5k
views
Comment:
C: lncRNA differential expression analysis
4.6 years ago by
seta
★ 1.9k
0
votes
1
reply
1.5k
views
Comment:
C: lncRNA differential expression analysis
4.6 years ago by
seta
★ 1.9k
868 results • Page
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