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4
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0
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7.2k
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Answer: C: Help with building bioinformatics workstation
7.4 years ago by Brian Bushnell 20k
1
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1
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3.8k
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Answer: A: How can I create a dummy dataset from my NGS whole-exome data?
7.4 years ago by Brian Bushnell 20k
1
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2
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2.6k
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Comment: C: Differentiating between chromosomal and plasmid DNA
7.4 years ago by Brian Bushnell 20k
1
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1
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10k
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Comment: C: Looking for reputable tool to find low complexity regions in FASTQ or BAM files
7.4 years ago by Brian Bushnell 20k
0
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0
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1.5k
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Answer: A: Removing targeted sequences from contigs
7.4 years ago by Brian Bushnell 20k
1
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0
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1.5k
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Comment: C: Discrepancy between number of SNP calls using samtools/bcftools when --skip-inde
7.4 years ago by Brian Bushnell 20k
0
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1
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3.3k
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Comment: C: Metagenome Read Simulators
7.4 years ago by Brian Bushnell 20k
1
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0
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1.4k
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Comment: C: Shifted alignments from Bowtie2
7.4 years ago by Brian Bushnell 20k
0
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0
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1.5k
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Comment: C: Transcriptional strand bias on SNV from exome data
7.4 years ago by Brian Bushnell 20k
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0
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3.0k
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Comment: C: align spike in database
7.4 years ago by Brian Bushnell 20k
1
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0
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35k
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Comment: C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
7.5 years ago by Brian Bushnell 20k
2
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2
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35k
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Comment: C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
7.5 years ago by Brian Bushnell 20k
2
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0
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2.1k
views
Answer: A: smallRNA low percentage of mapping, N at the beninning of the reads and kmers
7.5 years ago by Brian Bushnell 20k
1
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1
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5.1k
views
Comment: C: Use jellyfish with paired end sequencing data
7.5 years ago by Brian Bushnell 20k
3
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1
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5.1k
views
Answer: A: Use jellyfish with paired end sequencing data
7.5 years ago by Brian Bushnell 20k
2
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0
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1.4k
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Comment: C: Dereplication step leads to increased file size
7.5 years ago by Brian Bushnell 20k
0
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1
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16k
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Comment: C: Lossless ALAPY Fastq Compressor (now for MacOS X with 10-20% improved speed and
7.5 years ago by Brian Bushnell 20k
4
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0
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3.9k
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Answer: A: Genome size estimation discrepancy : Jellyfish k-mer Vs. estimate_genome_size.pl
7.5 years ago by Brian Bushnell 20k
0
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0
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1.5k
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Comment: C: Is there a software about statistic clean reads length distribution
7.5 years ago by Brian Bushnell 20k
0
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1
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2.4k
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Comment: C: How do I reduce the length of a contig?
7.5 years ago by Brian Bushnell 20k
0
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1
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3.0k
views
Comment: C: align spike in database
7.5 years ago by Brian Bushnell 20k
1
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0
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4.2k
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Comment: C: fasta files: keep only lines containing certain characters + the respective sequ
7.5 years ago by Brian Bushnell 20k
1
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0
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5.6k
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Comment: C: How to find the mapping quality (mapQ) score of a variant
7.5 years ago by Brian Bushnell 20k
1
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0
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2.5k
views
Comment: C: multiprocesses vs multithreads in application
7.5 years ago by Brian Bushnell 20k
1
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1
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2.5k
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Comment: C: multiprocesses vs multithreads in application
7.5 years ago by Brian Bushnell 20k
0
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0
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5.6k
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Comment: C: How to find the mapping quality (mapQ) score of a variant
7.5 years ago by Brian Bushnell 20k
1
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1
reply
3.1k
views
Comment: C: FASTQC Per base sequence quality fail after removal of adaptors
7.5 years ago by Brian Bushnell 20k
1
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1
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3.1k
views
Comment: C: FASTQC Per base sequence quality fail after removal of adaptors
7.5 years ago by Brian Bushnell 20k
0
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0
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3.0k
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Answer: C: align spike in database
7.5 years ago by Brian Bushnell 20k
1
vote
1
reply
35k
views
Comment: C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
7.5 years ago by Brian Bushnell 20k
0
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1
reply
3.3k
views
Comment: C: Pipe BBMap reformat output into SAMtools
7.5 years ago by Brian Bushnell 20k
0
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1
reply
3.3k
views
Comment: C: Pipe BBMap reformat output into SAMtools
7.5 years ago by Brian Bushnell 20k
1
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1
reply
3.3k
views
Comment: C: Pipe BBMap reformat output into SAMtools
7.5 years ago by Brian Bushnell 20k
1
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1
reply
4.2k
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Answer: A: What are the available methods to detect cross-sample contamination of NGS data?
7.5 years ago by Brian Bushnell 20k
0
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0
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3.4k
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Comment: C: How to determine gap length of aligned segments for a given read?
7.5 years ago by Brian Bushnell 20k
4
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1
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9.5k
views
Comment: C: Removing PCR duplicates - fastq or BAM?
7.5 years ago by Brian Bushnell 20k
0
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0
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9.5k
views
Comment: C: Removing PCR duplicates - fastq or BAM?
7.5 years ago by Brian Bushnell 20k
1
vote
1
reply
35k
views
Comment: C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
7.5 years ago by Brian Bushnell 20k
1
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0
replies
4.3k
views
Comment: C: Please help me with adapter-trimming
7.5 years ago by Brian Bushnell 20k
0
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0
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2.7k
views
Comment: C: Count mismatchs/Indel number per position in BAM file ?
7.5 years ago by Brian Bushnell 20k
0
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1
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2.0k
views
Answer: C: How to see what percentage of reads remain after quality filter to a certain phr
7.5 years ago by Brian Bushnell 20k
1
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1
reply
4.3k
views
Comment: C: Please help me with adapter-trimming
7.5 years ago by Brian Bushnell 20k
0
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1
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2.5k
views
Comment: C: bbmap callvariants.sh on pacbio
7.5 years ago by Brian Bushnell 20k
0
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0
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76k
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Comment: C: How To Remove The Same Sequences In The Fasta Files?
7.5 years ago by Brian Bushnell 20k
0
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1
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1.7k
views
Comment: C: Metagenome 16S reference
7.5 years ago by Brian Bushnell 20k
1
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1
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4.3k
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Comment: C: which one is adapter and which one is index
7.5 years ago by Brian Bushnell 20k
2
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0
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883
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Answer: A: Is there any tool can identify which copy of chromosome reads coming from?
7.5 years ago by Brian Bushnell 20k
0
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0
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4.3k
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Comment: C: which one is adapter and which one is index
7.5 years ago by Brian Bushnell 20k
0
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1
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1.7k
views
Comment: C: Metagenome 16S reference
7.5 years ago by Brian Bushnell 20k
2
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2
replies
5.0k
views
Answer: A: Why not merging?
7.5 years ago by Brian Bushnell 20k
2,080 results • Page 12 of 42
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