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Best way to query VCF for specific variants
vcf vcftools annotation bcftools
updated 23 months ago by ▴ 10 • written 8.9 years ago by ▴ 400
5
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1
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Answer: A: Query VCF for specific variants
updated 5.3 years ago by 44k • written 8.9 years ago by ▴ 400
1
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0
replies
5.2k
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Answer: A: Get alternate/total allele counts for 1000 Genomes super-populations
updated 6.1 years ago by 44k • written 9.9 years ago by ▴ 400
6
votes
0
replies
4.9k
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Answer: Answer: Rename INFO tags in a VCF file
updated 2.2 years ago by 44k • written 9.3 years ago by ▴ 400
9
votes
1
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4.9k
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Rename INFO tags in a VCF file
vcf vcftools awk sed bcftools
updated 2.2 years ago by 44k • written 9.3 years ago by ▴ 400
1
vote
1
reply
12k
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Comment: Comment: How to convert IMPUTE2 to VCF format
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 400
19
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0
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22k
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Answer: Answer: Addin gene information to VCF file
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 400
1
vote
1
reply
3.7k
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Filter a VCF using fields stored in a different VCF
vcf bcftools vcftools allele-frequency
updated 23 months ago by 44k • written 9.4 years ago by ▴ 400
0
votes
0
replies
5.2k
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Comment: Comment: Get alternate / total allele counts for 1000 Genomes super-populations
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 400
1
vote
3
replies
5.2k
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Get alternate / total allele counts for 1000 Genomes super-populations
1000Genomes vcf allele-counts bcf
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 400
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