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0
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1
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2.3k
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Comment: C: Samtools variant caller for each individual sample
7.8 years ago by bharata1803 ▴ 560
0
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1
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2.3k
views
Comment: C: Samtools variant caller for each individual sample
7.8 years ago by bharata1803 ▴ 560
0
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0
replies
5.1k
views
Comment: C: Converting SNP array variant data to VCF
7.8 years ago by bharata1803 ▴ 560
0
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2
replies
5.1k
views
Answer: A: Variant Call Format (VCF)
7.8 years ago by bharata1803 ▴ 560
0
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1
reply
2.3k
views
Error in plot-vcfstats
samtools bcftools
updated 3.4 years ago by ▴ 260 • written 7.8 years ago by ▴ 560
1
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0
replies
4.1k
views
Comment: C: Tools to analyze protein sequence if mutation occur
7.9 years ago by bharata1803 ▴ 560
4
votes
6
replies
4.1k
views
Tools to analyze protein sequence if mutation occur
sequence alignment
updated 7.9 years ago by 18k • written 7.9 years ago by ▴ 560
0
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1
reply
4.1k
views
Comment: C: Tools to analyze protein sequence if mutation occur
7.9 years ago by bharata1803 ▴ 560
5
votes
2
replies
2.5k
views
miRNA binding detection from RNA-seq reads
rna-seq micro-rna
updated 7.9 years ago by ▴ 610 • written 8.6 years ago by ▴ 560
0
votes
1
reply
3.8k
views
PPM, PSSM, and PWM
sequence
updated 8.1 years ago by 5.8k • written 8.1 years ago by ▴ 560
0
votes
0
replies
2.7k
views
Comment: C: Ensembl regulatory build promoter region and gene name
8.2 years ago by bharata1803 ▴ 560
0
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1
reply
2.7k
views
Comment: C: Ensembl regulatory build promoter region and gene name
8.2 years ago by bharata1803 ▴ 560
0
votes
1
reply
2.7k
views
Comment: C: Ensembl regulatory build promoter region and gene name
8.2 years ago by bharata1803 ▴ 560
0
votes
6
replies
2.7k
views
Ensembl regulatory build promoter region and gene name
promoter fasta
updated 8.2 years ago by 105k • written 8.2 years ago by ▴ 560
2
votes
2
replies
1.9k
views
Workshop or training related to Bioinformatics
workshop training
updated 8.4 years ago by ★ 5.2k • written 8.4 years ago by ▴ 560
0
votes
1
reply
2.3k
views
Is there any paper about motif finding based on PWM on genome sequence?
sequence PWM transcription factor
8.5 years ago by bharata1803 ▴ 560
0
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1
reply
8.8k
views
Comment: C: Download transfac public database
8.5 years ago by bharata1803 ▴ 560
0
votes
0
replies
1.9k
views
Answer: A: KEGG Gene Regulation Information
8.5 years ago by bharata1803 ▴ 560
0
votes
0
replies
8.8k
views
Comment: C: Download transfac public database
8.5 years ago by bharata1803 ▴ 560
4
votes
8
replies
8.8k
views
Download transfac public database
transcription factor transfac
updated 8.5 years ago by ▴ 440 • written 8.5 years ago by ▴ 560
0
votes
1
reply
8.8k
views
Comment: C: Download transfac public database
8.5 years ago by bharata1803 ▴ 560
0
votes
1
reply
6.6k
views
Comment: C: JASPAR motifs download
8.5 years ago by bharata1803 ▴ 560
4
votes
5
replies
6.6k
views
JASPAR motifs download
transcription factor jaspar sequence
8.5 years ago by bharata1803 ▴ 560
7
votes
1
reply
5.6k
views
Ensembl chromosome other than 1-22, X, and Y
chromosome ensembl
updated 8.5 years ago by 24k • written 8.5 years ago by ▴ 560
0
votes
0
replies
2.5k
views
Aligning TF binding site to target gene method
TFBS prediction
8.5 years ago by bharata1803 ▴ 560
0
votes
1
reply
3.0k
views
Comment: C: Transcription factor binding site prediction program/algorithm
8.5 years ago by bharata1803 ▴ 560
0
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0
replies
2.4k
views
Comment: C: Identify genes near occurrences of a TF binding sequence
8.5 years ago by bharata1803 ▴ 560
4
votes
3
replies
3.0k
views
Transcription factor binding site prediction program/algorithm
transcription factor prediction binding site
updated 8.5 years ago by ★ 1.1k • written 8.5 years ago by ▴ 560
4
votes
2
replies
7.5k
views
Cytoscape 3.3.0 visualize network with up/down regulated color
cytoscape
updated 8.6 years ago by 27k • written 8.6 years ago by ▴ 560
2
votes
3
replies
3.6k
views
Biological difference for selecting alignment reference to DNA vs cDNA
RNA-Seq alignment
updated 8.6 years ago by 47k • written 8.6 years ago by ▴ 560
0
votes
0
replies
3.6k
views
Comment: C: Biological difference for selecting alignment reference to DNA vs cDNA
8.6 years ago by bharata1803 ▴ 560
0
votes
1
reply
1.8k
views
Comment: C: How to visualize a set of sequence alignments that all have the same reference s
8.7 years ago by bharata1803 ▴ 560
2
votes
1
reply
1.8k
views
Answer: A: How to visualize a set of sequence alignments that all have the same reference s
8.7 years ago by bharata1803 ▴ 560
0
votes
0
replies
4.8k
views
Comment: C: Around 3 months short course or summer school in Bioinformatics
8.7 years ago by bharata1803 ▴ 560
0
votes
0
replies
4.8k
views
Comment: C: Around 3 months short course or summer school in Bioinformatics
8.7 years ago by bharata1803 ▴ 560
0
votes
0
replies
3.1k
views
Comment: C: miRNA binding position in gene transcript (alignment of cDNA FASTA and miRNA FAS
8.7 years ago by bharata1803 ▴ 560
0
votes
1
reply
2.0k
views
Generating simulated gene expression data sample based on DESeq2 result
R RNA-Seq
updated 8.7 years ago by 20 • written 8.8 years ago by ▴ 560
0
votes
1
reply
3.1k
views
Comment: C: miRNA binding position in gene transcript (alignment of cDNA FASTA and miRNA FAS
8.8 years ago by bharata1803 ▴ 560
0
votes
6
replies
3.1k
views
miRNA binding position in gene transcript (alignment of cDNA FASTA and miRNA FASTA file)
mirna sequence
updated 8.8 years ago by ▴ 520 • written 8.8 years ago by ▴ 560
0
votes
0
replies
3.1k
views
Comment: C: miRNA binding position in 5' UTR, CDS, and 3' UTR
8.8 years ago by bharata1803 ▴ 560
1
vote
4
replies
6.3k
views
Get sequence from aligned BAM file according to interval in BED file
alignment sequence
updated 8.8 years ago by ★ 1.2k • written 8.8 years ago by ▴ 560
0
votes
0
replies
6.3k
views
Comment: C: Get sequence from aligned BAM file according to interval in BED file
8.8 years ago by bharata1803 ▴ 560
1
vote
2
replies
2.3k
views
Finding miRNA motifs from Exome sequencing
exome-seq miRNA sequence
8.8 years ago by bharata1803 ▴ 560
0
votes
0
replies
6.3k
views
Comment: C: Download human 3 UTR FASTA file
8.8 years ago by bharata1803 ▴ 560
0
votes
3
replies
3.1k
views
Log expression for machine learning input
limma rna-seq deseq2
updated 2.4 years ago by 44k • written 9.0 years ago by ▴ 560
0
votes
1
reply
6.3k
views
Comment: C: Download human 3 UTR FASTA file
8.8 years ago by bharata1803 ▴ 560
0
votes
1
reply
6.3k
views
Comment: C: Download human 3 UTR FASTA file
8.8 years ago by bharata1803 ▴ 560
8
votes
7
replies
6.3k
views
Download human 3 UTR FASTA file
genome
8.8 years ago by bharata1803 ▴ 560
0
votes
1
reply
2.3k
views
Detecting miRNA effect from RNA-seq
RNA-Seq
updated 2.4 years ago by 44k • written 8.9 years ago by ▴ 560
4
votes
2
replies
2.2k
views
Get miRNA expression from RNA-seq
RNA-Seq alignment
updated 2.4 years ago by 44k • written 8.9 years ago by ▴ 560
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