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1.9k
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Comment: C: Riboseq - pairs unaligned to rRNA get mixed up
3.8 years ago by blur ▴ 280
0
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0
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1.9k
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Comment: C: Riboseq - pairs unaligned to rRNA get mixed up
3.8 years ago by blur ▴ 280
1
vote
7
replies
1.9k
views
Riboseq - pairs unaligned to rRNA get mixed up
riboseq bwa
3.8 years ago by blur ▴ 280
0
votes
11
replies
1.9k
views
No coverage in macs2 peak summit!
macs2 peaks
updated 3.8 years ago by 20 • written 4.0 years ago by ▴ 280
0
votes
0
replies
616
views
TopHat2 --prefilter-multihits option gives supp. alignments?
tophat2 --prefilter-multihits
3.9 years ago by blur ▴ 280
0
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0
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1.9k
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Comment: C: No coverage in macs2 peak summit!
4.0 years ago by blur ▴ 280
0
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0
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1.9k
views
Comment: C: No coverage in macs2 peak summit!
4.0 years ago by blur ▴ 280
0
votes
0
replies
1.9k
views
Comment: C: No coverage in macs2 peak summit!
4.0 years ago by blur ▴ 280
0
votes
0
replies
1.9k
views
Comment: C: No coverage in macs2 peak summit!
4.0 years ago by blur ▴ 280
0
votes
1
reply
1.9k
views
Comment: A: No coverage in macs2 peak summit!
4.0 years ago by blur ▴ 280
0
votes
3
replies
1.9k
views
Comment: C: No coverage in macs2 peak summit!
4.0 years ago by blur ▴ 280
0
votes
1
reply
926
views
compare two groups of multiple bed files
bed bedtools
updated 20 months ago by 44k • written 4.0 years ago by ▴ 280
1
vote
1
reply
4.0k
views
Comment: C: Cut & run - bowtie2 dovetail option
4.1 years ago by blur ▴ 280
5
votes
2
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4.0k
views
Cut & run - bowtie2 dovetail option
cut and run dovetail bowtie2
updated 22 months ago by • 0 • written 4.1 years ago by ▴ 280
0
votes
1
reply
1.3k
views
Comment: C: Trimmomatic Kseq and Bowtie --dovetail
4.1 years ago by blur ▴ 280
1
vote
1
reply
1.3k
views
htseq-count without GTF?
FPKM count htseq htseq-count gtf
updated 4.1 years ago by 85k • written 4.1 years ago by ▴ 280
0
votes
0
replies
690
views
How do I get a histone-to-gene table/map to correlate with genes?
histone
4.2 years ago by blur ▴ 280
0
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0
replies
999
views
Comment: C: GFF3 transcript name
4.2 years ago by blur ▴ 280
0
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0
replies
999
views
Comment: C: GFF3 transcript name
4.2 years ago by blur ▴ 280
2
votes
4
replies
999
views
GFF3 transcript name
gff3 gff transcript resource
4.2 years ago by blur ▴ 280
1
vote
3
replies
2.7k
views
R package or tool to draw peaks on chromosomes (like in UCSC)
R visualization ucsc
updated 4.2 years ago by ★ 3.4k • written 4.2 years ago by ▴ 280
0
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0
replies
2.7k
views
Comment: C: R package or tool to draw peaks on chromosomes (like in UCSC)
4.2 years ago by blur ▴ 280
0
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0
replies
839
views
Comment: C: MSA program that allows collpase of identical reads
4.3 years ago by blur ▴ 280
0
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0
replies
839
views
Comment: C: MSA program that allows collpase of identical reads
4.3 years ago by blur ▴ 280
0
votes
3
replies
839
views
MSA program that allows collpase of identical reads
MSA multi sequence alignmen collapse
updated 4.3 years ago by ★ 28k • written 4.3 years ago by ▴ 280
0
votes
0
replies
1.4k
views
Is there a way to download fasta files from Repbase free?
repbase
4.3 years ago by blur ▴ 280
0
votes
0
replies
542
views
Issue getting right strand in ccat
ccat peakranger chip-seq
4.3 years ago by blur ▴ 280
0
votes
1
reply
956
views
Finding regulatory or structural elements
ChIP-Seq structural elements
updated 4.4 years ago by ★ 3.0k • written 4.4 years ago by ▴ 280
0
votes
0
replies
644
views
How do I learn to do ribo_seq the right way?
ribo seq
4.4 years ago by blur ▴ 280
1
vote
1
reply
1.3k
views
Centrimo from the MEME-suit --neg option
centrimo meme neg
4.4 years ago by blur ▴ 280
1
vote
0
replies
1.3k
views
Answer: A: Centrimo from the MEME-suit --neg option
4.4 years ago by blur ▴ 280
0
votes
0
replies
1.2k
views
Answer: A: Finding motifs strategy
4.5 years ago by blur ▴ 280
0
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0
replies
1.7k
views
Comment: C: peak summit in macs not the highest point
4.5 years ago by blur ▴ 280
0
votes
1
reply
1.7k
views
Comment: C: peak summit in macs not the highest point
4.5 years ago by blur ▴ 280
0
votes
1
reply
1.7k
views
Comment: C: peak summit in macs not the highest point
4.5 years ago by blur ▴ 280
3
votes
7
replies
1.7k
views
peak summit in macs not the highest point
macs peak summit
4.5 years ago by blur ▴ 280
0
votes
0
replies
1.1k
views
Answer: A: How can get overlap size in bedtools multi-intersect?
4.5 years ago by blur ▴ 280
0
votes
2
replies
1.1k
views
How can get overlap size in bedtools multi-intersect?
bedtools multiintersect
4.5 years ago by blur ▴ 280
0
votes
0
replies
1.2k
views
Comment: C: ribosome profiling problems
4.8 years ago by blur ▴ 280
0
votes
1
reply
1.2k
views
Comment: C: ribosome profiling problems
4.8 years ago by blur ▴ 280
1
vote
4
replies
1.2k
views
ribosome profiling problems
ribosome profiling
4.8 years ago by blur ▴ 280
0
votes
0
replies
763
views
GTF to match transcriptome data in TopHat
TopHat transcriptome GTF
4.8 years ago by blur ▴ 280
11
votes
9
replies
7.3k
views
6 follow
How do I know if I have DNA contamination in RNA-seq data?
RNA-Seq contamination
updated 5.0 years ago by • 0 • written 5.7 years ago by ▴ 280
0
votes
0
replies
858
views
Comment: C: Where can I find a list of mitochondrial tRNA locations?
5.3 years ago by blur ▴ 280
0
votes
0
replies
858
views
Comment: C: Where can I find a list of mitochondrial tRNA locations?
5.3 years ago by blur ▴ 280
1
vote
5
replies
858
views
Where can I find a list of mitochondrial tRNA locations?
tRNAs
5.3 years ago by blur ▴ 280
1
vote
2
replies
937
views
DB for small RNAs in plant genomes?
small RNA DB
5.4 years ago by blur ▴ 280
0
votes
0
replies
937
views
Comment: C: DB for small RNAs in plant genomes?
5.4 years ago by blur ▴ 280
1
vote
3
replies
1.6k
views
high-throughput domain discovery
domain proteins
updated 5.6 years ago by ▴ 40 • written 6.8 years ago by ▴ 280
0
votes
1
reply
7.3k
views
Comment: C: How do I know if I have DNA contamination in RNA-seq data?
5.7 years ago by blur ▴ 280
214 results • Page 2 of 5
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