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1
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5
replies
6.8k
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bad quality in certain tiles according to "Per tile sequence quality" in FASTQC
fastqc Per tile sequence quality
5.7 years ago by blur ▴ 280
0
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1
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6.8k
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Comment: C: bad quality in certain tiles according to "Per tile sequence quality" in FASTQC
5.7 years ago by blur ▴ 280
0
votes
1
reply
6.8k
views
Comment: C: bad quality in certain tiles according to "Per tile sequence quality" in FASTQC
5.7 years ago by blur ▴ 280
0
votes
0
replies
2.3k
views
Comment: C: Filtering noise out of SAM file using CIGAR
6.0 years ago by blur ▴ 280
0
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1
reply
2.3k
views
Comment: C: Filtering noise out of SAM file using CIGAR
6.0 years ago by blur ▴ 280
0
votes
0
replies
3.6k
views
Comment: C: RNA-seq alignment rate is too low.
6.0 years ago by blur ▴ 280
2
votes
10
replies
2.3k
views
Filtering noise out of SAM file using CIGAR
SAM CIGAR
updated 6.0 years ago by ★ 3.3k • written 6.0 years ago by ▴ 280
0
votes
1
reply
2.3k
views
Comment: C: Filtering noise out of SAM file using CIGAR
6.0 years ago by blur ▴ 280
0
votes
0
replies
1.5k
views
Comment: C: Bulk extraction alias field from GeneCard
6.1 years ago by blur ▴ 280
0
votes
2
replies
1.5k
views
Bulk extraction alias field from GeneCard
genecards
6.1 years ago by blur ▴ 280
2
votes
2
replies
1.2k
views
Order of samtools mpileup - arbitrary or not?
samtools mpileup
updated 6.3 years ago by 104k • written 6.3 years ago by ▴ 280
2
votes
7
replies
2.2k
views
Can you get mpileup to report positions with coverage of 0?
samtools mpileup
updated 6.4 years ago by 104k • written 6.4 years ago by ▴ 280
0
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1
reply
2.2k
views
Comment: C: Can you get mpileup to report positions with coverage of 0?
6.4 years ago by blur ▴ 280
0
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1
reply
2.2k
views
Comment: C: Can you get mpileup to report positions with coverage of 0?
6.4 years ago by blur ▴ 280
2
votes
4
replies
1.0k
views
Lists of ncRNAS for cow, yeast
ncrna
updated 6.4 years ago by 147k • written 6.4 years ago by ▴ 280
0
votes
1
reply
1.0k
views
Comment: C: Lists of ncRNAS for cow, yeast
6.4 years ago by blur ▴ 280
0
votes
0
replies
1.4k
views
pileup vs. IGV insertion locations
pileup igv
6.6 years ago by blur ▴ 280
0
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0
replies
2.6k
views
Comment: C: IGV - is there a way to extract bulk information?
6.7 years ago by blur ▴ 280
5
votes
7
replies
2.6k
views
6 follow
IGV - is there a way to extract bulk information?
igv
updated 6.7 years ago by 22k • written 6.7 years ago by ▴ 280
0
votes
0
replies
3.1k
views
Comment: C: BWA vs. bowtie
6.8 years ago by blur ▴ 280
1
vote
2
replies
3.1k
views
BWA vs. bowtie
bowtie2 BWA NGS
updated 6.9 years ago by 104k • written 6.9 years ago by ▴ 280
0
votes
2
replies
11k
views
Comment: C: Picard tools duplicate removal
7.1 years ago by blur ▴ 280
7
votes
8
replies
11k
views
Picard tools duplicate removal
RNA-Seq picard-tools
7.1 years ago by blur ▴ 280
0
votes
0
replies
1.5k
views
Comment: C: Uploading bed3 format into Guitar package in R
7.2 years ago by blur ▴ 280
0
votes
1
reply
1.5k
views
Uploading bed3 format into Guitar package in R
RNA-Seq R guitar
7.2 years ago by blur ▴ 280
0
votes
7
replies
2.6k
views
Could not find or load main class net.sf.picard.sam.SortSam
ChIP-Seq RNA-Seq
written 7.5 years ago by ▴ 280
0
votes
0
replies
1.1k
views
A DB for rRNA, especially one containing rRNA pseudogenes?
RNA-Seq rRNA
7.3 years ago by blur ▴ 280
0
votes
0
replies
2.0k
views
Comment: C: Database for MOUSE small RNAs?
7.3 years ago by blur ▴ 280
1
vote
3
replies
2.0k
views
Database for MOUSE small RNAs?
RNA-Seq small RNA
updated 7.3 years ago by 147k • written 7.3 years ago by ▴ 280
0
votes
0
replies
3.9k
views
Comment: C: problem with BWA alignment
7.4 years ago by blur ▴ 280
4
votes
6
replies
3.9k
views
problem with BWA alignment
RNA-Seq bwa
updated 7.4 years ago by ▴ 240 • written 7.4 years ago by ▴ 280
3
votes
3
replies
4.3k
views
fastq_quality_trimmer: Premature End-Of-File
fastq_quality_trimmer fastx
updated 7.4 years ago by ★ 2.9k • written 7.4 years ago by ▴ 280
3
votes
2
replies
3.8k
views
trim galore putfiles
trim galore
updated 7.5 years ago by 5.3k • written 8.2 years ago by ▴ 280
1
vote
1
reply
3.6k
views
Comment: C: pileup format: what's the difference between upper and lower case?
7.5 years ago by blur ▴ 280
1
vote
4
replies
3.6k
views
pileup format: what's the difference between upper and lower case?
samtools pileup
updated 7.5 years ago by 104k • written 7.5 years ago by ▴ 280
0
votes
0
replies
2.6k
views
Comment: C: Could not find or load main class net.sf.picard.sam.SortSam
7.5 years ago by blur ▴ 280
0
votes
0
replies
2.6k
views
Comment: C: Could not find or load main class net.sf.picard.sam.SortSam
7.5 years ago by blur ▴ 280
0
votes
0
replies
1.7k
views
Comment: C: actual coverage vs. macs2
7.6 years ago by blur ▴ 280
0
votes
1
reply
1.7k
views
actual coverage vs. macs2
macs2 coverage coveragebed
7.6 years ago by blur ▴ 280
0
votes
0
replies
1.7k
views
Comment: C: FASTQC problem - repetitive k-mer
7.6 years ago by blur ▴ 280
0
votes
3
replies
1.7k
views
FASTQC problem - repetitive k-mer
RNA-Seq fastqc kmer
7.6 years ago by blur ▴ 280
2
votes
3
replies
2.2k
views
Recommendations for a good motif-finder, for short K-mers?
k-mer motif
updated 7.7 years ago by ▴ 70 • written 7.7 years ago by ▴ 280
0
votes
0
replies
2.2k
views
Comment: C: Recommendations for a good motif-finder, for short K-mers?
7.7 years ago by blur ▴ 280
3
votes
6
replies
6.2k
views
bedtools shuffle vs. random
bedtools
updated 7.7 years ago by ★ 3.4k • written 7.7 years ago by ▴ 280
0
votes
0
replies
6.2k
views
Comment: C: bedtools shuffle vs. random
7.7 years ago by blur ▴ 280
8
votes
2
replies
8.6k
views
The bed12 format
bed12
updated 7.7 years ago by 8.9k • written 7.7 years ago by ▴ 280
1
vote
2
replies
1.7k
views
Consensus secondary RNA stractures
RNA secondary stracture RNAfold
updated 7.8 years ago by 21k • written 7.8 years ago by ▴ 280
1
vote
0
replies
1.8k
views
Comment: C: High throughput RNA secondary structure predictor
7.8 years ago by blur ▴ 280
0
votes
0
replies
1.8k
views
Comment: C: High throughput RNA secondary structure predictor
7.8 years ago by blur ▴ 280
0
votes
1
reply
1.8k
views
Comment: C: High throughput RNA secondary structure predictor
7.8 years ago by blur ▴ 280
214 results • Page 3 of 5
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