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2
votes
6
replies
1.8k
views
High throughput RNA secondary structure predictor
RNA-Seq RNA secondary strucrure
7.8 years ago by blur ▴ 280
0
votes
1
reply
1.7k
views
Comment: C: creating an MSA file for 20+ million reads whith non-directional sequences
7.8 years ago by blur ▴ 280
2
votes
4
replies
1.7k
views
creating an MSA file for 20+ million reads whith non-directional sequences
RNA-Seq RNA MSA
7.8 years ago by blur ▴ 280
0
votes
1
reply
2.7k
views
Comment: C: bowtie2 --un option problems
7.9 years ago by blur ▴ 280
0
votes
4
replies
2.7k
views
bowtie2 --un option problems
bowtie2
updated 7.9 years ago by ★ 3.6k • written 7.9 years ago by ▴ 280
2
votes
4
replies
3.2k
views
cutadapt --cut option for paired-end reads?
cutadapt
updated 7.9 years ago by ▴ 100 • written 8.0 years ago by ▴ 280
4
votes
13
replies
4.8k
views
uneven paired end reads in bowtie
bowtie2 cutadapt
updated 8.0 years ago by 8.6k • written 8.0 years ago by ▴ 280
0
votes
0
replies
4.8k
views
Comment: C: uneven paired end reads in bowtie
8.0 years ago by blur ▴ 280
0
votes
1
reply
4.8k
views
Comment: C: uneven paired end reads in bowtie
8.0 years ago by blur ▴ 280
0
votes
2
replies
4.8k
views
Answer: A: uneven paired end reads in bowtie
8.0 years ago by blur ▴ 280
0
votes
1
reply
4.8k
views
Answer: A: uneven paired end reads in bowtie
8.0 years ago by blur ▴ 280
0
votes
1
reply
4.8k
views
Answer: A: uneven paired end reads in bowtie
8.0 years ago by blur ▴ 280
0
votes
0
replies
1.0k
views
Problems setting up cutadapt
cutadapt
8.0 years ago by blur ▴ 280
0
votes
1
reply
3.8k
views
How do I find an example of how to calculate FPKM with cufflinks?
cufflinks fpkm
updated 8.0 years ago by ★ 5.2k • written 8.0 years ago by ▴ 280
1
vote
1
reply
3.0k
views
bcftools soft filters (-s)
bcftools filters
updated 8.0 years ago by 164k • written 8.0 years ago by ▴ 280
7
votes
7
replies
2.8k
views
Bcftools magic string
bcftools
updated 8.0 years ago by 14k • written 8.0 years ago by ▴ 280
0
votes
1
reply
2.8k
views
Comment: C: Bcftools magic string
8.0 years ago by blur ▴ 280
0
votes
0
replies
2.6k
views
Comment: C: problem creating PDF file in R(guitar package)
8.0 years ago by blur ▴ 280
1
vote
3
replies
2.6k
views
problem creating PDF file in R(guitar package)
R; Guitar
8.0 years ago by blur ▴ 280
7
votes
5
replies
1.9k
views
NGS tutorials (RNA)
NGS
updated 8.0 years ago by 13k • written 8.0 years ago by ▴ 280
2
votes
5
replies
2.5k
views
PE reads uneven after cutadapt
fastx bowtie
updated 8.0 years ago by 15k • written 8.0 years ago by ▴ 280
0
votes
0
replies
3.7k
views
Comment: C: determining read depth for every position in a sequence
8.0 years ago by blur ▴ 280
4
votes
3
replies
3.7k
views
determining read depth for every position in a sequence
RNA samtools read depth
updated 8.0 years ago by ★ 1.2k • written 8.0 years ago by ▴ 280
0
votes
2
replies
2.2k
views
Comment: C: Bowtie2 have low global alignment rates in RNA-seq
8.0 years ago by blur ▴ 280
0
votes
1
reply
2.2k
views
Comment: C: Bowtie2 have low global alignment rates in RNA-seq
8.0 years ago by blur ▴ 280
1
vote
6
replies
2.2k
views
Bowtie2 have low global alignment rates in RNA-seq
eCLIP BOWTIE2
8.0 years ago by blur ▴ 280
0
votes
1
reply
2.6k
views
Comment: C: MACS2 and duplicates
8.1 years ago by blur ▴ 280
1
vote
3
replies
2.6k
views
MACS2 and duplicates
macs2
8.1 years ago by blur ▴ 280
0
votes
0
replies
1.5k
views
Comment: C: cutadapt -o versus >
8.1 years ago by blur ▴ 280
0
votes
1
reply
1.5k
views
Comment: C: cutadapt -o versus >
8.1 years ago by blur ▴ 280
2
votes
4
replies
1.5k
views
cutadapt -o versus >
cutadapt
updated 8.1 years ago by 104k • written 8.1 years ago by ▴ 280
3
votes
3
replies
3.8k
views
trim_galore finds a different adaptor than the one I expected...
trim galore
updated 8.1 years ago by ★ 5.0k • written 8.1 years ago by ▴ 280
0
votes
0
replies
3.8k
views
Comment: C: trim_galore finds a different adaptor than the one I expected...
8.1 years ago by blur ▴ 280
0
votes
1
reply
2.1k
views
Comment: C: UCSC peak calling - weird results
8.1 years ago by blur ▴ 280
0
votes
3
replies
2.1k
views
UCSC peak calling - weird results
ucsc peak-calling
updated 8.1 years ago by ★ 5.2k • written 8.1 years ago by ▴ 280
0
votes
0
replies
2.3k
views
Comment: C: FASTX error - quality score
8.1 years ago by blur ▴ 280
0
votes
2
replies
2.3k
views
FASTX error - quality score
FASTX
8.1 years ago by blur ▴ 280
3
votes
2
replies
1.0k
views
keeping trimmed edges
trimming
updated 8.1 years ago by 104k • written 8.1 years ago by ▴ 280
1
vote
1
reply
4.3k
views
Bam to WIG
bam
8.1 years ago by blur ▴ 280
2
votes
4
replies
15k
views
R1 and R2 in sequencing data
NGS
updated 8.1 years ago by ▴ 130 • written 8.1 years ago by ▴ 280
0
votes
0
replies
15k
views
Comment: C: R1 and R2 in sequencing data
8.1 years ago by blur ▴ 280
0
votes
0
replies
1.6k
views
Comment: C: picard-tool markduplicate gets stuck in traversing
8.2 years ago by blur ▴ 280
0
votes
1
reply
1.6k
views
Comment: C: picard-tool markduplicate gets stuck in traversing
8.2 years ago by blur ▴ 280
0
votes
0
replies
1.6k
views
Comment: C: picard-tool markduplicate gets stuck in traversing
8.2 years ago by blur ▴ 280
6
votes
7
replies
1.6k
views
picard-tool markduplicate gets stuck in traversing
picard tools
8.2 years ago by blur ▴ 280
0
votes
0
replies
8.9k
views
Comment: C: How do I find unmapped reads in my sam file?
8.2 years ago by blur ▴ 280
0
votes
1
reply
8.9k
views
Comment: C: How do I find unmapped reads in my sam file?
8.2 years ago by blur ▴ 280
2
votes
5
replies
8.9k
views
How do I find unmapped reads in my sam file?
SAM
updated 8.2 years ago by ▴ 700 • written 8.2 years ago by ▴ 280
1
vote
4
replies
1.6k
views
is there a DB for illumina adaptors/contamination?
sequencing RNA-Seq
updated 8.2 years ago by 47k • written 8.2 years ago by ▴ 280
0
votes
0
replies
1.4k
views
A question about cutadapt
cutadapt RNA-Seq
8.2 years ago by blur ▴ 280
214 results • Page 4 of 5
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