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comments
2
votes
0
replies
1.8k
views
Answer:
A: cwltool --print-dot generate same format as cwl viewer
5.8 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
1
reply
1.4k
views
Comment:
C: CWL Workflow removing input files
5.8 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
1
reply
2.4k
views
Answer:
C: CWL with R returns empty output directory with "Final process status is success"
5.8 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
0
replies
2.6k
views
Comment:
C: CWL can't find tools it's supposed to run
5.9 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
1
reply
2.6k
views
Comment:
C: CWL can't find tools it's supposed to run
5.9 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
3.2k
views
Comment:
C: Staging subdirectories in CWL
5.9 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
1
reply
2.6k
views
Answer:
A: CWL can't find tools it's supposed to run
5.9 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
4.3k
views
Comment:
C: CWL: How to refer to input or scattered value of a step
5.9 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
1
reply
1.5k
views
Comment:
C: load/parse cwl using Java
6.0 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
1
reply
1.4k
views
Comment:
C: How to specify enum symbols in record type definition?
6.0 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
3.8k
views
Comment:
C: best practice for renaming file in CWL workflow
6.0 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
1
reply
1.4k
views
Answer:
A: How to specify enum symbols in record type definition?
6.0 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
2.2k
views
Answer:
A: How to run SPAdes inside docker?
6.0 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
2.2k
views
Comment:
C: How to run SPAdes inside docker?
6.0 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
0
replies
2.3k
views
Answer:
A: Load/parse cwl in python
6.0 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
1
reply
4.1k
views
Comment:
C: CWL: How to return int or string[] from CommandLineTool?
6.1 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
1
reply
4.1k
views
Answer:
A: CWL: How to return int or string[] from CommandLineTool?
6.1 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
1.8k
views
Answer:
A: cwltool issue using SoftwareRequirement
6.1 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
1
reply
3.8k
views
Comment:
C: best practice for renaming file in CWL workflow
6.1 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
2
replies
3.8k
views
Answer:
A: best practice for renaming file in CWL workflow
6.1 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
0
replies
1.2k
views
Answer:
A: possible to show job names in toil stats command using cwl workflow
6.1 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
1.4k
views
Answer:
A: Possible to combine inputs using valueFrom for scatter
6.2 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
1.4k
views
Comment:
C: CWL Error Empty Scatter
6.2 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
1.4k
views
Comment:
C: CWL Error Empty Scatter
6.2 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
2.3k
views
Comment:
C: [cwl] referencing to list of paths in an array of files or direcories
6.4 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
0
replies
2.3k
views
Answer:
A: [cwl] referencing to list of paths in an array of files or direcories
6.4 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
2.7k
views
Comment:
C: change temp folder in cwl
6.4 years ago by
Michael R. Crusoe
★ 1.9k
3
votes
1
reply
1.7k
views
Answer:
A: How does cwltool actually check file formats?
6.4 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
1.4k
views
Comment:
C: Is there a way to convert ["null", File] to File in CWL?
6.4 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
0
replies
1.9k
views
Comment:
C: String concatenation for output
6.5 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
2.9k
views
Comment:
C: CommandLineTool doesn't finish
6.5 years ago by
Michael R. Crusoe
★ 1.9k
3
votes
1
reply
2.9k
views
Comment:
C: CommandLineTool doesn't finish
6.5 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
1
reply
3.2k
views
Comment:
C: Staging subdirectories in CWL
6.5 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
1
reply
1.5k
views
Answer:
A: How do I specify the elements of an array of output files?
6.5 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
11k
views
Comment:
C: Online course: Learn Bioinformatics in 100 hours
6.5 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
2.0k
views
Comment:
C: Output files in the input directory
6.5 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
2.5k
views
Comment:
C: Two inputs combining to a single command line argument in CWL
6.5 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
0
replies
2.5k
views
Comment:
C: Two inputs combining to a single command line argument in CWL
6.5 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
1.6k
views
Comment:
C: cwlexec and cwltool not interpreting baseCommand the same way
6.5 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
1
reply
1.6k
views
Answer:
A: cwlexec and cwltool not interpreting baseCommand the same way
6.5 years ago by
Michael R. Crusoe
★ 1.9k
3
votes
2
replies
2.5k
views
Answer:
A: Two inputs combining to a single command line argument in CWL
6.5 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
1.8k
views
Answer:
A: CWL DockerRequirements and -volume destination
6.5 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
0
replies
4.0k
views
Answer:
A: Is there a good way to test CWL tools and workflows?
6.5 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
4.0k
views
Comment:
C: Is there a good way to test CWL tools and workflows?
6.5 years ago by
Michael R. Crusoe
★ 1.9k
3
votes
0
replies
966
views
Answer:
A: CWL: Is there a way to have a list of imported Record types as an input?
6.5 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
3.1k
views
Answer:
A: Workflows! Where is the code?
6.5 years ago by
Michael R. Crusoe
★ 1.9k
2
votes
0
replies
1.4k
views
Answer:
A: CWL: Is there a way to only pass certain fields from a `record` type to a step?
6.6 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
805
views
Answer:
A: Gather sorting by parameter in the metadata of input file
6.6 years ago by
Michael R. Crusoe
★ 1.9k
0
votes
0
replies
1.4k
views
Answer:
A: CWL: Specify type of input file
6.8 years ago by
Michael R. Crusoe
★ 1.9k
1
vote
1
reply
1.5k
views
Answer:
A: cwl: unrecognized extension field, $schemas section
6.8 years ago by
Michael R. Crusoe
★ 1.9k
221 results • Page
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