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Comment: C: StringTie - A transcript matching to multiple genes
5.1 years ago by c_u ▴ 520
0
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0
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3.3k
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Comment: C: Issue with DESeq2: Unable to create a DESeqDataSet because names in colData don'
5.2 years ago by c_u ▴ 520
0
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1
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3.5k
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Comment: C: Stringie output doesn't have any gene names!
5.2 years ago by c_u ▴ 520
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0
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5.6k
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Comment: C: blast+ with a degenerate nucleotide
5.2 years ago by c_u ▴ 520
0
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0
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3.5k
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Comment: C: Stringie output doesn't have any gene names!
5.2 years ago by c_u ▴ 520
1
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0
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3.5k
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Comment: C: transcript count after string tie merge
5.2 years ago by c_u ▴ 520
0
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0
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5.0k
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Comment: C: Why run FeatureCounts after Stringtie? (Galaxy recommends!)
5.3 years ago by c_u ▴ 520
7
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3
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5.0k
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Why run FeatureCounts after Stringtie? (Galaxy recommends!)
RNA-Seq
updated 5.3 years ago by ★ 4.1k • written 5.3 years ago by ▴ 520
0
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0
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3.5k
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Comment: C: How do you find novel transcripts using GFFcompare?
5.4 years ago by c_u ▴ 520
1
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2
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3.5k
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How do you find novel transcripts using GFFcompare?
RNA-Seq gffcompare
5.4 years ago by c_u ▴ 520
0
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0
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3.2k
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Comment: C: Where to find a valid GTF file for stringtie asssembly?
5.4 years ago by c_u ▴ 520
17
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13
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3.7k
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Can you detect novel (non-coding) transcripts using Salmon and the hg38 transcriptome?
RNA-Seq
5.4 years ago by c_u ▴ 520
0
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1
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3.7k
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Comment: C: Can you detect novel (non-coding) transcripts using Salmon and the hg38 transcri
5.4 years ago by c_u ▴ 520
0
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1
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3.7k
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Comment: C: Can you detect novel (non-coding) transcripts using Salmon and the hg38 transcri
5.4 years ago by c_u ▴ 520
0
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0
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3.7k
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Comment: C: Can you detect novel (non-coding) transcripts using Salmon and the hg38 transcri
5.4 years ago by c_u ▴ 520
0
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1
reply
1.2k
views
Comment: C: Measure expression level of a single (novel) transcript in multiple fastq files
5.5 years ago by c_u ▴ 520
8
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3
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1.2k
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Measure expression level of a single (novel) transcript in multiple fastq files
RNA-Seq
5.5 years ago by c_u ▴ 520
0
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2
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1.3k
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Comment: C: How to find read count for a newly discovered transcript
5.6 years ago by c_u ▴ 520
8
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6
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1.3k
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How to find read count for a newly discovered transcript
RNA-Seq trinity
5.6 years ago by c_u ▴ 520
0
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1
reply
1.5k
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Comment: C: Basic question about using ./configure for installing a software
5.7 years ago by c_u ▴ 520
0
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1
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1.5k
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Comment: C: Basic question about using ./configure for installing a software
5.7 years ago by c_u ▴ 520
0
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1
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18k
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Comment: C: STAR align multiple files
5.8 years ago by c_u ▴ 520
0
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0
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6.6k
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Comment: C: How To Find The Locations Of A Short Specific Sequence In A Genome With 1 Or 2 M
6.3 years ago by c_u ▴ 520
0
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1
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6.6k
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Comment: C: How To Find The Locations Of A Short Specific Sequence In A Genome With 1 Or 2 M
6.3 years ago by c_u ▴ 520
0
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1
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6.2k
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Comment: C: Extract R1 and R2 bam files from merged bam file
6.4 years ago by c_u ▴ 520
5
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5
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6.2k
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Extract R1 and R2 bam files from merged bam file
RNA-Seq samtools
updated 6.4 years ago by 35k • written 6.4 years ago by ▴ 520
0
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0
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6.2k
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Comment: C: Extract R1 and R2 bam files from merged bam file
6.4 years ago by c_u ▴ 520
0
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0
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1.8k
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Comment: C: Why does this samtools command work?
6.4 years ago by c_u ▴ 520
0
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1
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1.8k
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Comment: C: Why does this samtools command work?
6.4 years ago by c_u ▴ 520
4
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4
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1.8k
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Why does this samtools command work?
RNA-Seq samtools
updated 6.4 years ago by 35k • written 6.4 years ago by ▴ 520
0
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0
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3.2k
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Answer: A: Insillico dual restriction enzyme reference genome digestion.
6.5 years ago by c_u ▴ 520
0
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0
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1.2k
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Can we look at interactions between host genome and pathogen genome from Hi-C data?
genome genomics human genome interactions
6.5 years ago by c_u ▴ 520
0
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0
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1.7k
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Comment: C: Finding restriction sites when the gene is on the negative strand
6.5 years ago by c_u ▴ 520
3
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5
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1.7k
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Finding restriction sites when the gene is on the negative strand
dna rna strand
updated 6.5 years ago by ★ 2.9k • written 6.5 years ago by ▴ 520
0
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0
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1.7k
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Comment: C: Finding restriction sites when the gene is on the negative strand
6.5 years ago by c_u ▴ 520
0
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1
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4.9k
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Comment: C: how to find the total number of recognition sequence of a restriction enzyme in
6.5 years ago by c_u ▴ 520
0
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0
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11k
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Comment: C: Genomic Restriction Finder
6.5 years ago by c_u ▴ 520
0
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0
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1.7k
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Comment: C: Is there gold standard data for ancestral reconstruction?
6.6 years ago by c_u ▴ 520
0
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1
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1.7k
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Comment: C: Is there gold standard data for ancestral reconstruction?
6.6 years ago by c_u ▴ 520
4
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6
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1.7k
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Is there gold standard data for ancestral reconstruction?
phylogenetics evolution protein gene
updated 6.6 years ago by 27k • written 6.6 years ago by ▴ 520
0
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0
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1.7k
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Comment: C: Is there a gold standard for ancestral reconstruction?
6.6 years ago by c_u ▴ 520
0
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1
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3.0k
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Comment: C: GTF2BED does not provide meaningful output?
7.0 years ago by c_u ▴ 520
2
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3
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3.0k
views
GTF2BED does not provide meaningful output?
gtf bed RNA-Seq
updated 7.0 years ago by 36k • written 7.0 years ago by ▴ 520
0
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0
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4.0k
views
Comment: C: How to get a list of all ribosomal genes in Rat?
7.0 years ago by c_u ▴ 520
0
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1
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4.0k
views
Comment: C: How to get a list of all ribosomal genes in Rat?
7.0 years ago by c_u ▴ 520
0
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1
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4.0k
views
Comment: C: How to get a list of all ribosomal genes in Rat?
7.0 years ago by c_u ▴ 520
8
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10
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4.0k
views
How to get a list of all ribosomal genes in Rat?
RNA-Seq rat gene-list
updated 7.0 years ago by ▴ 480 • written 7.0 years ago by ▴ 520
0
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1
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4.6k
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Comment: C: Finding over-represented sequences in fastq file
7.0 years ago by c_u ▴ 520
0
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1
reply
4.6k
views
Comment: C: Finding over-represented sequences in fastq file
7.0 years ago by c_u ▴ 520
0
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1
reply
4.6k
views
Comment: C: Finding over-represented sequences in fastq file
7.0 years ago by c_u ▴ 520
176 results • Page 3 of 4
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