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0
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806
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Comment: Comment: Junior Research Software Engineer/ Research Software Engineer - web resources fo
8 months ago by Joseph Hughes ★ 3.0k
1
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2
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806
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Job: Junior Research Software Engineer/ Research Software Engineer - web resources for virology
software developer web virology
8 months ago by Joseph Hughes ★ 3.0k
6
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11
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4.0k
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Using Ensembl API to get a Gene ID from a protein ID
ensembl API
updated 2.1 years ago by 44k • written 9.3 years ago by ★ 3.0k
0
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1
reply
964
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Comment: Comment: Retrieving the corresponding Haplotype CDS from Ensembl
3.4 years ago by Joseph Hughes ★ 3.0k
2
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3
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964
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Retrieving the corresponding Haplotype CDS from Ensembl
gene Ensembl protein Haplotype
updated 3.4 years ago by 24k • written 3.4 years ago by ★ 3.0k
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0
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794
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Comment: C: How to download sequence of a protein from all available species from NCBI?
3.9 years ago by Joseph Hughes ★ 3.0k
1
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0
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840
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Comment: C: Do I need to search for the complementary sequence when using regex?
3.9 years ago by Joseph Hughes ★ 3.0k
0
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1
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4.2k
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How to prepare a BED file to make a sashimi plot in IGV?
IGV sashimi BED
updated 2.3 years ago by 44k • written 8.9 years ago by ★ 3.0k
3
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0
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5.6k
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Answer: A: Compare two trees in Newick format
updated 4.9 years ago by 44k • written 10.5 years ago by ★ 3.0k
0
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0
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2.9k
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Comment: C: How to download an alignment from TreeBase according to accession numbers
updated 4.9 years ago by 44k • written 10.5 years ago by ★ 3.0k
0
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1
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2.9k
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Answer: A: How to download an alignment from TreeBase according to accession numbers
updated 4.9 years ago by 44k • written 10.5 years ago by ★ 3.0k
2
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1
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5.9k
views
Answer: A: Phylogenetic tree for 16S rRNA with whole taxonomy included
updated 4.9 years ago by 44k • written 10.5 years ago by ★ 3.0k
0
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1
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2.1k
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Comment: C: Is there a good reason for multi-locus phylogeny when there is PHT conflict?
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 3.0k
1
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0
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6.0k
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Comment: C: Analysis Of Short Tandem Repeats/Trinucleotides In Ngs Data -- Revisited
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 3.0k
2
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1
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4.7k
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Answer: A: Any tool to generate protein similarity matrix
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 3.0k
0
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0
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50k
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Comment: C: Reference Assembly - Mapping Reads To A Reference Genome
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 3.0k
0
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0
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3.8k
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Answer: A: Could you explain the percentage of A, C , G, T in hg19 ?
updated 4.9 years ago by 44k • written 8.8 years ago by ★ 3.0k
0
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0
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9.4k
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Comment: C: R functions that extract the ORF from a sequence
updated 5.0 years ago by 44k • written 9.2 years ago by ★ 3.0k
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0
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4.0k
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Comment: C: Using Ensembl API to get a Gene ID from a protein ID
updated 5.1 years ago by 44k • written 9.3 years ago by ★ 3.0k
0
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1
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4.0k
views
Comment: C: Using Ensembl API to get a Gene ID from a protein ID
updated 5.1 years ago by 44k • written 9.3 years ago by ★ 3.0k
0
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1
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4.0k
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Comment: C: Using Ensembl API to get a Gene ID from a protein ID
updated 5.1 years ago by 44k • written 9.3 years ago by ★ 3.0k
0
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1
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4.2k
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Answer: A: Viral genome annotation
5.1 years ago by Joseph Hughes ★ 3.0k
2
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1
reply
1.7k
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Answer: A: calculating confidence intervals of boostrapped trees
5.1 years ago by Joseph Hughes ★ 3.0k
1
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1
reply
2.9k
views
Answer: A: #Reads Per Contig Information From Assemblies Other Than Velvet
updated 5.2 years ago by 44k • written 12.8 years ago by ★ 3.0k
2
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2
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1.2k
views
In the reformat tool of BBmap what is the meaning of Read1_linear and Read1_log
BBmap quality reads
updated 5.2 years ago by 35k • written 5.2 years ago by ★ 3.0k
0
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0
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22k
views
Answer: A: R: Ape Making An Ultrametric, Rooted, Binary Tree Which Can Be Converted Into An
updated 5.2 years ago by 44k • written 12.0 years ago by ★ 3.0k
0
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2
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12k
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Comment: C: Draw Minimum Spanning Tree (Mst) With Pie Charts In R
updated 5.4 years ago by 44k • written 12.6 years ago by ★ 3.0k
1
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1
reply
12k
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Answer: A: Draw Minimum Spanning Tree (Mst) With Pie Charts In R
updated 5.4 years ago by 44k • written 12.7 years ago by ★ 3.0k
0
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1
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1.8k
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Comment: C: Is there a way to calculate the maximum length at which the frequencies of k-mer
5.5 years ago by Joseph Hughes ★ 3.0k
0
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3
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1.8k
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Is there a way to calculate the maximum length at which the frequencies of k-mers can be accurately estimated?
k-mer frequency
5.5 years ago by Joseph Hughes ★ 3.0k
1
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0
replies
1.7k
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Job: Deadline 26th of March: Research Database Curator
HCV virus data-curator
updated 19 months ago by 44k • written 5.7 years ago by ★ 3.0k
0
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0
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2.8k
views
Job: Bioinformatician position at the Centre for Virus Research - Glasgow, UK
evolution HIV outbreak phylogenetics
updated 18 months ago by 44k • written 5.8 years ago by ★ 3.0k
0
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0
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1.7k
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Answer: A: Phylonet -a taxa map parameter
5.8 years ago by Joseph Hughes ★ 3.0k
1
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0
replies
5.0k
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Comment: C: How to give merged reads as input in spades
5.8 years ago by Joseph Hughes ★ 3.0k
0
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0
replies
2.7k
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Answer: A: Any database for downloading cancer cell-lines transcriptome differential expres
5.9 years ago by Joseph Hughes ★ 3.0k
0
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0
replies
4.0k
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Answer: A: How calculate CG content for each contig in an transcript assembly?
5.9 years ago by Joseph Hughes ★ 3.0k
2
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0
replies
2.6k
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Answer: A: plot and show support values in consensus tree from n nj euclidean distance matr
5.9 years ago by Joseph Hughes ★ 3.0k
1
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1
reply
5.0k
views
Answer: A: How to give merged reads as input in spades
5.9 years ago by Joseph Hughes ★ 3.0k
0
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2
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1.4k
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Comment: C: How to submit a Pilon fasta output to the RAST annotation service using Shell or
5.9 years ago by Joseph Hughes ★ 3.0k
0
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0
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1.2k
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Comment: C: Assembling ESTs and illumina reads
5.9 years ago by Joseph Hughes ★ 3.0k
1
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2
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1.2k
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Assembling ESTs and illumina reads
transcriptome ESTs Illumina de-novo
5.9 years ago by Joseph Hughes ★ 3.0k
0
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0
replies
2.2k
views
Answer: A: Is there a tool for making a synteny blocks of a gene with its downstream and up
6.0 years ago by Joseph Hughes ★ 3.0k
0
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0
replies
1.7k
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Answer: A: Where to get Epimatrix algorithm from for epitope binding prediction?
6.0 years ago by Joseph Hughes ★ 3.0k
2
votes
1
reply
2.3k
views
Assembly With Phrap With Some Missing Quality Files.
assembly fasta quality
updated 6.2 years ago by 44k • written 14.5 years ago by ★ 3.0k
2
votes
2
replies
11k
views
Answer: A: Help With Understanding The Output Of Codeml From The Paml Package
updated 6.2 years ago by 44k • written 14.5 years ago by ★ 3.0k
5
votes
4
replies
11k
views
Help With Understanding The Output Of Codeml From The Paml Package
paml codeml selection
updated 6.2 years ago by 44k • written 14.6 years ago by ★ 3.0k
2
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0
replies
2.6k
views
Comment: C: Method for creating an EMBL formatted annotated sequence?
6.8 years ago by Joseph Hughes ★ 3.0k
0
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0
replies
3.8k
views
Comment: C: How to build an NJ tree with an IBS distance matrix computed by PLINK?
6.8 years ago by Joseph Hughes ★ 3.0k
1
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0
replies
1.5k
views
Answer: A: Porting genome annotations from virus RefSeq to new strain: any web tools?
6.8 years ago by Joseph Hughes ★ 3.0k
0
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0
replies
8.2k
views
Comment: C: kraken: unable to download the databases from ncbi
6.8 years ago by Joseph Hughes ★ 3.0k
250 results • Page 1 of 5
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