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450
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Comment: Comment: How to make the length of the CDS of my bed file divisible by 3?
3 months ago by i.sudbery 20k
1
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450
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Comment: Comment: How to make the length of the CDS of my bed file divisible by 3?
3 months ago by i.sudbery 20k
0
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0
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1.2k
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Comment: Comment: How to solve DESeq2 Error in checkFullRank(modelMatrix) cause by biological repl
3 months ago by i.sudbery 20k
1
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1
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1.2k
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Answer: Answer: How to solve DESeq2 Error in checkFullRank(modelMatrix) cause by biological repl
3 months ago by i.sudbery 20k
1
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1
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1.1k
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Comment: Comment: why R scripts are preferred to biopython for RNA-Seq analyses?
3 months ago by i.sudbery 20k
0
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0
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599
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Comment: Comment: DESeq2 results vs. shrinkage results
4 months ago by i.sudbery 20k
4
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0
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1.2k
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Answer: Answer: How to improve a bioinformatics study and paper so that it is not considered "to
4 months ago by i.sudbery 20k
2
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0
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1.0k
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Comment: Comment: meaning of "primary alignment" in samtools
4 months ago by i.sudbery 20k
4
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1
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1.0k
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Answer: Answer: meaning of "primary alignment" in samtools
4 months ago by i.sudbery 20k
2
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1
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387
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Answer: Answer: Defining the formula/contrasts to detect DEGs between pre vs post treatment
4 months ago by i.sudbery 20k
0
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0
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411
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Comment: Comment: Normalizacion RNASeq Doubts
4 months ago by i.sudbery 20k
1
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1
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470
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Comment: Comment: Multiple same UMI's mapped to the same cell with different sequence
4 months ago by i.sudbery 20k
4
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1
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470
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Answer: Answer: Multiple same UMI's mapped to the same cell with different sequence
4 months ago by i.sudbery 20k
0
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0
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357
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Comment: Comment: Chimeric reads analysis
4 months ago by i.sudbery 20k
2
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1
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552
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Comment: Comment: best way to submit hpc job using snakemake
4 months ago by i.sudbery 20k
1
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1
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752
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Answer: Answer: Differential analysis of enrichment results
4 months ago by i.sudbery 20k
1
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1
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357
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Comment: Comment: Chimeric reads analysis
4 months ago by i.sudbery 20k
1
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0
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723
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Answer: Answer: scRNA-seq: Do people eliminate housekeeping genes for the sake of increasing alg
4 months ago by i.sudbery 20k
2
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1
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552
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Answer: Answer: best way to submit hpc job using snakemake
4 months ago by i.sudbery 20k
3
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0
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310
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Answer: Answer: Batch correction between cancer only data and normal only data
4 months ago by i.sudbery 20k
0
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1
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449
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Comment: Comment: Demultiplexing Tool
4 months ago by i.sudbery 20k
1
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0
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525
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Comment: Comment: IGV - ChIP-Seq
4 months ago by i.sudbery 20k
2
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0
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365
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Answer: Answer: Statistical test or method to test relationship between nearby genes and CpG sit
4 months ago by i.sudbery 20k
1
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0
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732
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Answer: Answer: Zero FPKM values after stringtie quantification
4 months ago by i.sudbery 20k
0
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0
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3.0k
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Comment: Comment: How to extract unmapped mate for specific reads using pysam or other module in p
4 months ago by i.sudbery 20k
0
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1
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338
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Answer: Answer: Error installing ACTIONet
4 months ago by i.sudbery 20k
0
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1
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384
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Comment: Comment: Changing existing identifiers in RNASeq data to gene names
4 months ago by i.sudbery 20k
0
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0
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277
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Answer: Answer: Computer modelling of metformin effect on mitochondria
5 months ago by i.sudbery 20k
0
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0
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542
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Comment: Comment: Fold changes reversed - DESeq2
5 months ago by i.sudbery 20k
0
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0
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715
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Comment: Comment: Does PRS distribution of target data should follow gaussian distribution?
5 months ago by i.sudbery 20k
4
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2
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715
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Answer: Answer: Does PRS distribution of target data should follow gaussian distribution?
5 months ago by i.sudbery 20k
1
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0
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652
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Comment: Comment: Extracting UMIs from NEXTFLEX Small RNA-Seq reads using UMI_tools
5 months ago by i.sudbery 20k
2
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0
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542
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Comment: Comment: Fold changes reversed - DESeq2
5 months ago by i.sudbery 20k
1
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0
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526
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Comment: Comment: New versions of the same transcripts ID may have different exons coordinates??
5 months ago by i.sudbery 20k
1
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0
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652
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Answer: Answer: Extracting UMIs from NEXTFLEX Small RNA-Seq reads using UMI_tools
5 months ago by i.sudbery 20k
1
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0
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526
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Comment: Comment: New versions of the same transcripts ID may have different exons coordinates??
5 months ago by i.sudbery 20k
0
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1
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719
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Comment: Comment: Looking for clarification of .vcf output from variant calling
5 months ago by i.sudbery 20k
0
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0
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1.1k
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Comment: Comment: Deseq2 , Limma - the paired test seems to be incorrect - is it known problem ?
5 months ago by i.sudbery 20k
0
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1
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1.1k
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Comment: Comment: Deseq2 , Limma - the paired test seems to be incorrect - is it known problem ?
5 months ago by i.sudbery 20k
0
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1
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1.1k
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Answer: Answer: Deseq2 , Limma - the paired test seems to be incorrect - is it known problem ?
5 months ago by i.sudbery 20k
1
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0
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1.1k
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Comment: Comment: Deseq2 , Limma - the paired test seems to be incorrect - is it known problem ?
updated 5 months ago by 44k • written 5 months ago by 20k
0
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1
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331
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Comment: Comment: Bias in FDR distribution
5 months ago by i.sudbery 20k
1
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1
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403
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Answer: Answer: Does it make sense to use scRNAseq for this experiment?
5 months ago by i.sudbery 20k
2
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1
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829
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Answer: Answer: How do you make an original contribution to knowledge in applied bioinformatics?
5 months ago by i.sudbery 20k
1
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0
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923
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Comment: Comment: PCA plot no distinct cluster. Only p < 0.05 indicates significant DEGs, while ad
5 months ago by i.sudbery 20k
2
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0
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390
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Comment: Comment: Combining microarray, RNA Seq, whole & exome sequencing
5 months ago by i.sudbery 20k
0
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0
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436
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Comment: Comment: How to Split FASTQ File by UMI Indices into Multiple Files
5 months ago by i.sudbery 20k
1
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0
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1.2k
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Comment: Comment: UMI-Tools knee-method has great influence on the results of white list
5 months ago by i.sudbery 20k
1
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2
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12k
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Comment: Comment: log2 fold change in RNA-seq analysis
6 months ago by i.sudbery 20k
0
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0
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1.8k
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Comment: Comment: Ideal PC configurations and operating system for bioinformatics laboratory
6 months ago by i.sudbery 20k
1,611 results • Page 2 of 33
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