Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
0
replies
3.1k
views
Answer: Answer: sequence extraction from multifast file using IDs in another text file
updated 2.3 years ago by 44k • written 9.6 years ago by 10k
0
votes
0
replies
31k
views
Answer: A: Filtering Fasta Sequences By Chromosomes Names From A Big Fasta File
updated 5.3 years ago by 44k • written 9.6 years ago by 10k
3
votes
0
replies
15k
views
Answer: Answer: How to get length of selected contigs within a fasta file generated by transcrip
updated 2.2 years ago by 44k • written 9.6 years ago by 10k
0
votes
0
replies
2.7k
views
Answer: Answer: Masking Variable Sites in a Fasta File
updated 2.2 years ago by 44k • written 9.7 years ago by 10k
4
votes
0
replies
9.1k
views
Answer: A: extract sequences from multi fasta using partial ID
updated 5.3 years ago by 44k • written 10.1 years ago by 10k
3
votes
1
reply
39k
views
Answer: A: how to convert a long fasta-file into many separate single fasta sequences
updated 5.4 years ago by 44k • written 10.6 years ago by 10k
0
votes
1
reply
4.1k
views
Comment: C: [Error] getting fasta file from 1000genomes
updated 5.4 years ago by 44k • written 10.6 years ago by 10k
0
votes
0
replies
9.1k
views
Comment: C: Not having root access sucks; installing software without root privileges
updated 5.4 years ago by 44k • written 10.7 years ago by 10k
6
votes
2
replies
9.1k
views
Answer: A: Not having root access sucks; installing software without root privileges
updated 5.4 years ago by 44k • written 10.7 years ago by 10k
2
votes
1
reply
3.3k
views
Answer: A: Bowtie2 allowing mismatches syntax issue
updated 5.4 years ago by 44k • written 10.8 years ago by 10k
2
votes
1
reply
5.7k
views
Comment: C: Samtools Have Trouble "View" Bwa Mem Result, But Good With Bwa Sampe Result?
updated 5.4 years ago by 44k • written 10.9 years ago by 10k
7
votes
1
reply
17k
views
Answer: A: Sra Format Questions: How To Get A Sam File That Can Be Converted To Bam?
updated 5.4 years ago by 44k • written 11.0 years ago by 10k
0
votes
0
replies
17k
views
Comment: C: Sra Format Questions: How To Get A Sam File That Can Be Converted To Bam?
updated 5.4 years ago by 44k • written 11.0 years ago by 10k
3
votes
2
replies
6.8k
views
Answer: A: How To Prepare Gatk .Vcf Files Output For Annovar ?
updated 5.4 years ago by 44k • written 11.6 years ago by 10k
0
votes
0
replies
9.8k
views
Comment: C: Best Human Genome Reference File For Gatk?
updated 5.4 years ago by 44k • written 11.6 years ago by 10k
1
vote
1
reply
13k
views
Answer: A: Finding Out Adapters Information In Small Rna Seq Data
updated 5.4 years ago by 44k • written 12.2 years ago by 10k
4
votes
1
reply
5.2k
views
Answer: A: Vcf File With Variants And Genotypes For A "Single Individual"
updated 5.4 years ago by 44k • written 12.5 years ago by 10k
3
votes
0
replies
97k
views
Comment: C: How To Split One Big Sequence File Into Multiple Files With Less Than 1000 Seque
updated 5.4 years ago by 44k • written 9.5 years ago by 10k
0
votes
0
replies
78k
views
Comment: C: Extract User Defined Region From An Fasta File
updated 5.5 years ago by 44k • written 9.5 years ago by 10k
0
votes
1
reply
78k
views
Comment: C: Extract User Defined Region From An Fasta File
updated 5.5 years ago by 44k • written 9.5 years ago by 10k
3
votes
1
reply
29k
views
Comment: C: Ibd (Identity By Descent) And The Chosen Value Of Pi_Hat
5.7 years ago by Matt Shirley 10k
24
votes
1
reply
48k
views
Answer: A: Get chromosome sizes from fasta file
updated 5.8 years ago by 44k • written 9.1 years ago by 10k
5
votes
1
reply
7.3k
views
Answer: A: Using parallel with Mem
updated 5.9 years ago by 89k • written 10.8 years ago by 10k
1
vote
0
replies
213k
views
Comment: C: Correct Way To Parse A Fasta File In Python
6.0 years ago by Matt Shirley 10k
3
votes
1
reply
213k
views
Comment: C: Correct Way To Parse A Fasta File In Python
6.0 years ago by Matt Shirley 10k
15
votes
0
replies
24k
views
Answer: A: Remove Vcf Header Lines
updated 6.0 years ago by 12k • written 12.6 years ago by 10k
0
votes
0
replies
4.7k
views
Comment: C: Get Random Alignments From Sam File
updated 6.1 years ago by 44k • written 11.4 years ago by 10k
0
votes
0
replies
4.7k
views
Comment: C: Get Random Alignments From Sam File
updated 6.1 years ago by 44k • written 11.4 years ago by 10k
2
votes
0
replies
3.9k
views
Comment: C: The "Rareness" Of Two Adjacent Nonsynonymous Mutations.
updated 6.1 years ago by 44k • written 12.4 years ago by 10k
0
votes
1
reply
3.9k
views
Comment: C: The "Rareness" Of Two Adjacent Nonsynonymous Mutations.
updated 6.1 years ago by 44k • written 12.4 years ago by 10k
5
votes
2
replies
14k
views
Answer: A: Is there a tool to transform GenomeStudio genotype format to VCF?
updated 6.1 years ago by 44k • written 10.6 years ago by 10k
1
vote
1
reply
2.5k
views
Comment: C: RNA seq - TMM values
6.3 years ago by Matt Shirley 10k
2
votes
1
reply
1.9k
views
Answer: A: Get sequences from a BAM file as strings spaced out as described by cigar
6.3 years ago by Matt Shirley 10k
90
votes
1
reply
197k
views
Answer: A: Generate Vcf.Gz File And Its Index File Vcf.Gz.Tbi
updated 6.4 years ago by 44k • written 12.2 years ago by 10k
44
votes
0
replies
77k
views
Answer: A: Sequence length from Fasta
updated 6.4 years ago by 44k • written 10.3 years ago by 10k
0
votes
0
replies
48k
views
Comment: C: Get chromosome sizes from fasta file
6.4 years ago by Matt Shirley 10k
0
votes
0
replies
4.4k
views
Comment: C: Sort Sequences In A Fasta File According To The peg List
updated 6.4 years ago by 44k • written 9.0 years ago by 10k
1
vote
1
reply
2.4k
views
Comment: C: Importing big sequences into Python
updated 6.4 years ago by 44k • written 9.0 years ago by 10k
1
vote
1
reply
3.1k
views
Comment: C: Retrieve the sequence based on the start and end position in the cuffmerged.gtf
updated 6.4 years ago by 44k • written 9.0 years ago by 10k
1
vote
0
replies
5.0k
views
Answer: A: Problem iterating through BAM file using pysam
updated 6.4 years ago by 44k • written 9.0 years ago by 10k
4
votes
0
replies
213k
views
Answer: Answer: Correct Way To Parse A Fasta File In Python
updated 15 months ago by 44k • written 10.6 years ago by 10k
0
votes
0
replies
213k
views
Comment: Comment: Correct Way To Parse A Fasta File In Python
updated 15 months ago by 44k • written 8.0 years ago by 10k
0
votes
0
replies
3.4k
views
Comment: C: is this a potential mosaicism?
6.5 years ago by Matt Shirley 10k
6
votes
2
replies
3.4k
views
Answer: A: is this a potential mosaicism?
6.5 years ago by Matt Shirley 10k
0
votes
0
replies
89k
views
Comment: C: How To Extract A Sequence From A Big (6Gb) Multifasta File ?
6.6 years ago by Matt Shirley 10k
7
votes
0
replies
38k
views
Comment: C: How Do I Convert Fa Files To Bed Format?
6.6 years ago by Matt Shirley 10k
0
votes
0
replies
29k
views
Comment: C: Converting Gvcf Files Into Vcf
6.9 years ago by Matt Shirley 10k
2
votes
1
reply
4.7k
views
Answer: A: How to use pysam to execute "samtools fastq xxx.sam>xxx.fastq"
6.9 years ago by Matt Shirley 10k
1
vote
0
replies
4.7k
views
Comment: C: How to use pysam to execute "samtools fastq xxx.sam>xxx.fastq"
6.9 years ago by Matt Shirley 10k
0
votes
0
replies
7.0k
views
Answer: A: Rename FASTA files according to FASTA file header
7.0 years ago by Matt Shirley 10k
696 results • Page 2 of 14
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6