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1
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0
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3.4k
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Answer: Answer: sequence extraction from multifast file using IDs in another text file
updated 2.6 years ago by 45k • written 9.9 years ago by 10k
0
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0
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32k
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Answer: A: Filtering Fasta Sequences By Chromosomes Names From A Big Fasta File
updated 5.6 years ago by 45k • written 9.9 years ago by 10k
3
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0
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16k
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Answer: Answer: How to get length of selected contigs within a fasta file generated by transcrip
updated 2.5 years ago by 45k • written 10.0 years ago by 10k
0
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0
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2.9k
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Answer: Answer: Masking Variable Sites in a Fasta File
updated 2.5 years ago by 45k • written 10.0 years ago by 10k
4
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0
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9.3k
views
Answer: A: extract sequences from multi fasta using partial ID
updated 5.7 years ago by 45k • written 10.4 years ago by 10k
3
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1
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40k
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Answer: A: how to convert a long fasta-file into many separate single fasta sequences
updated 5.7 years ago by 45k • written 10.9 years ago by 10k
0
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1
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4.3k
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Comment: C: [Error] getting fasta file from 1000genomes
updated 5.7 years ago by 45k • written 10.9 years ago by 10k
0
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0
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9.9k
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Comment: C: Not having root access sucks; installing software without root privileges
updated 5.7 years ago by 45k • written 11.0 years ago by 10k
6
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2
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9.9k
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Answer: A: Not having root access sucks; installing software without root privileges
updated 5.7 years ago by 45k • written 11.0 years ago by 10k
2
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1
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3.4k
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Answer: A: Bowtie2 allowing mismatches syntax issue
updated 5.7 years ago by 45k • written 11.1 years ago by 10k
2
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1
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5.9k
views
Comment: C: Samtools Have Trouble "View" Bwa Mem Result, But Good With Bwa Sampe Result?
updated 5.7 years ago by 45k • written 11.2 years ago by 10k
7
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1
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17k
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Answer: A: Sra Format Questions: How To Get A Sam File That Can Be Converted To Bam?
updated 5.7 years ago by 45k • written 11.3 years ago by 10k
0
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0
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17k
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Comment: C: Sra Format Questions: How To Get A Sam File That Can Be Converted To Bam?
updated 5.7 years ago by 45k • written 11.3 years ago by 10k
3
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2
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7.0k
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Answer: A: How To Prepare Gatk .Vcf Files Output For Annovar ?
updated 5.7 years ago by 45k • written 11.9 years ago by 10k
0
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0
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10k
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Comment: C: Best Human Genome Reference File For Gatk?
updated 5.7 years ago by 45k • written 11.9 years ago by 10k
1
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1
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14k
views
Answer: A: Finding Out Adapters Information In Small Rna Seq Data
updated 5.7 years ago by 45k • written 12.5 years ago by 10k
4
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1
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5.4k
views
Answer: A: Vcf File With Variants And Genotypes For A "Single Individual"
updated 5.7 years ago by 45k • written 12.8 years ago by 10k
3
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0
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99k
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Comment: C: How To Split One Big Sequence File Into Multiple Files With Less Than 1000 Seque
updated 5.7 years ago by 45k • written 9.8 years ago by 10k
0
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0
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79k
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Comment: C: Extract User Defined Region From An Fasta File
updated 5.8 years ago by 45k • written 9.8 years ago by 10k
0
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1
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79k
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Comment: C: Extract User Defined Region From An Fasta File
updated 5.8 years ago by 45k • written 9.8 years ago by 10k
3
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1
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30k
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Comment: C: Ibd (Identity By Descent) And The Chosen Value Of Pi_Hat
6.0 years ago by Matt Shirley 10k
24
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1
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51k
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Answer: A: Get chromosome sizes from fasta file
updated 6.1 years ago by 45k • written 9.4 years ago by 10k
5
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1
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7.6k
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Answer: A: Using parallel with Mem
updated 6.2 years ago by 89k • written 11.1 years ago by 10k
1
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0
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218k
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Comment: C: Correct Way To Parse A Fasta File In Python
6.3 years ago by Matt Shirley 10k
3
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1
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218k
views
Comment: C: Correct Way To Parse A Fasta File In Python
6.3 years ago by Matt Shirley 10k
15
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0
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24k
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Answer: A: Remove Vcf Header Lines
updated 6.3 years ago by 12k • written 12.9 years ago by 10k
0
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0
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4.9k
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Comment: C: Get Random Alignments From Sam File
updated 6.4 years ago by 45k • written 11.8 years ago by 10k
0
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0
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4.9k
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Comment: C: Get Random Alignments From Sam File
updated 6.4 years ago by 45k • written 11.8 years ago by 10k
2
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0
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4.3k
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Comment: C: The "Rareness" Of Two Adjacent Nonsynonymous Mutations.
updated 6.4 years ago by 45k • written 12.7 years ago by 10k
0
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1
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4.3k
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Comment: C: The "Rareness" Of Two Adjacent Nonsynonymous Mutations.
updated 6.4 years ago by 45k • written 12.7 years ago by 10k
5
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2
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15k
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Answer: A: Is there a tool to transform GenomeStudio genotype format to VCF?
updated 6.5 years ago by 45k • written 11.0 years ago by 10k
1
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1
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2.7k
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Comment: C: RNA seq - TMM values
6.6 years ago by Matt Shirley 10k
2
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1
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2.0k
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Answer: A: Get sequences from a BAM file as strings spaced out as described by cigar
6.6 years ago by Matt Shirley 10k
91
votes
1
reply
203k
views
Answer: A: Generate Vcf.Gz File And Its Index File Vcf.Gz.Tbi
updated 6.7 years ago by 45k • written 12.5 years ago by 10k
44
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0
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81k
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Answer: A: Sequence length from Fasta
updated 6.7 years ago by 45k • written 10.6 years ago by 10k
0
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0
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51k
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Comment: C: Get chromosome sizes from fasta file
6.7 years ago by Matt Shirley 10k
0
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0
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4.8k
views
Comment: C: Sort Sequences In A Fasta File According To The peg List
updated 6.7 years ago by 45k • written 9.3 years ago by 10k
1
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1
reply
2.6k
views
Comment: C: Importing big sequences into Python
updated 6.7 years ago by 45k • written 9.3 years ago by 10k
1
vote
1
reply
3.4k
views
Comment: C: Retrieve the sequence based on the start and end position in the cuffmerged.gtf
updated 6.7 years ago by 45k • written 9.3 years ago by 10k
1
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0
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5.2k
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Answer: A: Problem iterating through BAM file using pysam
updated 6.7 years ago by 45k • written 9.3 years ago by 10k
4
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0
replies
218k
views
Answer: Answer: Correct Way To Parse A Fasta File In Python
updated 19 months ago by 45k • written 10.9 years ago by 10k
0
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0
replies
218k
views
Comment: Comment: Correct Way To Parse A Fasta File In Python
updated 19 months ago by 45k • written 8.3 years ago by 10k
0
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0
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3.9k
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Comment: C: is this a potential mosaicism?
6.9 years ago by Matt Shirley 10k
6
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2
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3.9k
views
Answer: A: is this a potential mosaicism?
6.9 years ago by Matt Shirley 10k
0
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0
replies
91k
views
Comment: C: How To Extract A Sequence From A Big (6Gb) Multifasta File ?
6.9 years ago by Matt Shirley 10k
7
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0
replies
40k
views
Comment: C: How Do I Convert Fa Files To Bed Format?
6.9 years ago by Matt Shirley 10k
0
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0
replies
30k
views
Comment: C: Converting Gvcf Files Into Vcf
7.2 years ago by Matt Shirley 10k
2
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1
reply
5.1k
views
Answer: A: How to use pysam to execute "samtools fastq xxx.sam>xxx.fastq"
7.2 years ago by Matt Shirley 10k
1
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0
replies
5.1k
views
Comment: C: How to use pysam to execute "samtools fastq xxx.sam>xxx.fastq"
7.2 years ago by Matt Shirley 10k
0
votes
0
replies
7.5k
views
Answer: A: Rename FASTA files according to FASTA file header
7.3 years ago by Matt Shirley 10k
696 results • Page 2 of 14
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