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4
votes
1
reply
1.2k
views
Answer:
A: Inter-RNAseq dataset operations?
4.6 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
2.2k
views
Comment:
C: RNA de novo assembly - blasts - KEGG - GO
4.6 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
1
reply
1.8k
views
Answer:
A: DRIMSeq problems with dmPrecision
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
1
vote
0
replies
9.6k
views
Answer:
A: CPM or TPM in GSEA analysis
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
1
vote
0
replies
2.4k
views
Answer:
A: Event-based software for alternative splicing with three conditions?
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
2.4k
views
Comment:
C: Event-based software for alternative splicing with three conditions?
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
1
reply
860
views
Comment:
C: Cellular development RNAseq
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
1.1k
views
Comment:
C: Incomplete Open Read Frames (ORFs) in Mikado annotation
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
1
reply
1.1k
views
Answer:
A: Incomplete Open Read Frames (ORFs) in Mikado annotation
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
1
vote
0
replies
1.7k
views
Comment:
C: Differential expression with very imbalanced groups
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
2
votes
0
replies
829
views
Answer:
A: Learning RNASeq Analysis using my own DATA that needs to be analyzed
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
3.2k
views
Comment:
C: Calculating differential expression genes between two sample sequenced using 10x
4.9 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
3
votes
1
reply
3.2k
views
Answer:
A: Calculating differential expression genes between two sample sequenced using 10x
4.9 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
2
votes
0
replies
2.8k
views
Answer:
A: How to compare two sets of results from Limma?
4.9 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
2.2k
views
Comment:
C: deleting TCGA replicated samples
4.9 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
2.2k
views
Comment:
C: deleting TCGA replicated samples
4.9 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
977
views
Comment:
C: OUTRIDER for gene expression outliers (could not find function "OutriderDataSet"
4.9 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
4
votes
0
replies
2.5k
views
Answer:
A: The best tool for time course differential expression with R
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
4.1k
views
Comment:
C: Definition of an isoform switching?
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
4.1k
views
Comment:
C: Differential expression tool that can take TPM as input?
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
4.1k
views
Comment:
C: Definition of an isoform switching?
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
13
votes
1
reply
7.2k
views
Comment:
C: Bioinformatics vs. the Climate Crisis
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
3
votes
1
reply
2.1k
views
Answer:
A: Plot normalized coverage across genes/transcripts in single cell rna seq data
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
3
votes
1
reply
11k
views
Answer:
A: ANOVA for RNA-seq data?
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
3.3k
views
Answer:
A: Some problems with DEXSEQ analyse
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
1
vote
2
replies
1.2k
views
Answer:
A: Packages in R for analyze premature stop codon and GC contents
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
1.4k
views
Answer:
A: How can I get true transcript_ids from StringTie?
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
1
vote
0
replies
865
views
Comment:
C: DEXSeq counts data for WGCNA analysis
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
760
views
Comment:
C: When I use the function fpkmSCVPlot via cummeRbund, I get one of the lines is ho
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
1
vote
0
replies
1.3k
views
Answer:
A: Validation tools in bioinformatics
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
1
vote
0
replies
4.7k
views
Answer:
A: Thousands of significant differentially expressed genes but no significant enric
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
1
vote
0
replies
2.8k
views
Answer:
A: Best way to find novel non-coding transcripts from stranded RNA-seq data
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
4.6k
views
Answer:
A: any tool or R package for integrated analysis of miRNA and mRNA expression data
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
4.6k
views
Comment:
C: any tool or R package for integrated analysis of miRNA and mRNA expression data
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
4.6k
views
Comment:
C: any tool or R package for integrated analysis of miRNA and mRNA expression data
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
1
vote
0
replies
1.6k
views
Answer:
A: SAM flags needed for paired-end strand-specific differential expression
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
3
votes
0
replies
952
views
Answer:
A: is there any database that show RNA false positive?
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
1.5k
views
Answer:
A: Extract Transcript sequence from fastq file (Plant RNA-Seq data)
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
2.8k
views
Comment:
C: co-expression analysis from a scRNA-seq data
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
1.1k
views
Comment:
C: single contig de novo assembly
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
5.5k
views
Comment:
C: RNA-Seq Read Counting using featureCounts
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
4.1k
views
Comment:
C: Analysis rMATS of RNA Seq data
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
1.1k
views
Comment:
C: how should i filter the TCGA data to find the time series data in normal tussue
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
1.1k
views
Answer:
A: how should i filter the TCGA data to find the time series data in normal tussue
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
1.8k
views
Comment:
C: High intronic mappings in the RNASeq
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
1
vote
1
reply
5.5k
views
Comment:
C: RNA-Seq Read Counting using featureCounts
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
1
vote
0
replies
6.5k
views
Comment:
C: Difference in R1 and R2 FASTQ files from RNA seq paired end
5.1 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
2
votes
0
replies
2.2k
views
Answer:
A: IsoSeq full length de novo assembly using trinity
5.1 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
1
reply
5.7k
views
Comment:
C: RNA velocity on 5' 10x data?
5.1 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
0
votes
0
replies
1.5k
views
Comment:
C: CPAT error while analysis
5.1 years ago by
Kristoffer Vitting-Seerup
★ 4.1k
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