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1
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0
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66k
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Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 4.5 years ago by 44k • written 12.6 years ago by ★ 2.8k
7
votes
7
replies
3.7k
views
6 follow
Commercial Ngs Analysis Suites - Rate Them
next-gen sequencing analysis software
written 13.2 years ago by ★ 2.8k
0
votes
0
replies
5.5k
views
Comment: C: Has Anyone Heard Of Noiseq? A New Method For Differential Expression Analysis.
updated 5.1 years ago by 44k • written 13.3 years ago by ★ 2.8k
0
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5
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4.5k
views
Answer: A: Benchmarking Read Alignment And Variant-Calling Algorithms (For Dummies)
updated 5.2 years ago by 44k • written 13.3 years ago by ★ 2.8k
0
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7
replies
2.1k
views
Tophat2/Bowtie failing to align some examples of partial intron retention / exon loss
RNA-Seq alignment
updated 5.9 years ago by 8.3k • written 5.9 years ago by ★ 2.8k
0
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1
reply
2.1k
views
Answer: A: Tophat2/Bowtie failing to align some examples of partial intron retention / exon
5.9 years ago by Travis ★ 2.8k
0
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1
reply
2.1k
views
Comment: C: Tophat2/Bowtie failing to align some examples of partial intron retention / exon
5.9 years ago by Travis ★ 2.8k
0
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0
replies
2.1k
views
Comment: C: Tophat2/Bowtie failing to align some examples of partial intron retention / exon
5.9 years ago by Travis ★ 2.8k
17
votes
12
replies
5.1k
views
7 follow
Has Anyone Tried Rum For Aligning/Counting Illumina Rna-Seq Data?
rna alignment
updated 6.4 years ago by 20 • written 13.3 years ago by ★ 2.8k
61
votes
27
replies
28k
views
18 follow
Links To Good Next Gen Sequence Analysis Training Courses And Centres
next-gen sequencing analysis workshops training
updated 2.7 years ago by 44k • written 13.3 years ago by ★ 2.8k
3
votes
14
replies
6.9k
views
Problems With Bioconductor'S Genomicfeatures Package
r bioconductor next-gen sequencing rna
updated 8.2 years ago by ▴ 460 • written 13.3 years ago by ★ 2.8k
11
votes
5
replies
4.8k
views
Genomic Alignment And Snp/Indel Calling - My First Ever "Pipeline"
snp indel next-gen sequencing
updated 8.8 years ago by 20 • written 13.5 years ago by ★ 2.8k
4
votes
8
replies
4.2k
views
Bwa Aln For Snp/Indel Discovery With Paired End 100Bp Human Dna Reads
bwa dna next-gen sequencing snp indel
updated 8.8 years ago by 20 • written 13.5 years ago by ★ 2.8k
1
vote
4
replies
4.2k
views
Vcf Files With (Simulated) Phenotypes For Association Studies
association vcf next-gen sequencing simulation
updated 9.0 years ago by 20 • written 12.8 years ago by ★ 2.8k
6
votes
21
replies
7.8k
views
Problem Installing Bioconductor "Goseq" Package
bioconductor rna next-gen sequencing r
updated 2.4 years ago by 44k • written 13.0 years ago by ★ 2.8k
3
votes
1
reply
2.9k
views
Good Resource To Learn About 'Smaller' De Novo Eukaryotic Genome Assembly
next-gen sequencing denovo assembly genome
updated 9.7 years ago by 20 • written 12.8 years ago by ★ 2.8k
100
votes
12
replies
38k
views
14 follow
Best Software For Detection Of Somatic Mutations From Matched Tumor:Normal Ngs Data
somatic-mutation variant-calling SNV
updated 3.2 years ago by 44k • written 12.7 years ago by ★ 2.8k
3
votes
6
replies
3.5k
views
Srma (Short Read Micro-Aligner) Optimising For Speed
short alignment snp next-gen sequencing
updated 10.4 years ago by 20 • written 13.4 years ago by ★ 2.8k
0
votes
4
replies
4.0k
views
Rna-Seq And Multivariate Classifiers
next-gen sequencing classification rna
updated 10.6 years ago by 20 • written 13.2 years ago by ★ 2.8k
4
votes
1
reply
29k
views
Answer: A: How To Identify Targets Of A Transcription Factor ?
11.0 years ago by Travis ★ 2.8k
0
votes
1
reply
3.7k
views
Comment: C: Comparing Rpkms For One Test Sample Vs Multiple Controls
11.0 years ago by Travis ★ 2.8k
0
votes
3
replies
3.7k
views
Comparing Rpkms For One Test Sample Vs Multiple Controls
rna-seq differential-expression next-gen
updated 11.0 years ago by ▴ 280 • written 11.0 years ago by ★ 2.8k
18
votes
8
replies
11k
views
7 follow
Introducing Known Mutations (From A Vcf) Into A Fasta File
mutation vcf fasta next-gen sequencing
updated 11.4 years ago by 12k • written 12.8 years ago by ★ 2.8k
14
votes
10
replies
4.7k
views
Using Simngs To Generate Reads
next-gen sequencing read simulation illumina
updated 11.5 years ago by ▴ 140 • written 13.5 years ago by ★ 2.8k
4
votes
4
replies
3.7k
views
Illumina Ngs Test Data For Snp/Indel Calling And Association Study
next-gen sequencing snp association
updated 11.6 years ago by ▴ 60 • written 13.5 years ago by ★ 2.8k
8
votes
0
replies
72k
views
Answer: A: Database Of Tumor Suppressors And/Or Oncogenes
11.8 years ago by Travis ★ 2.8k
0
votes
0
replies
4.0k
views
Comment: C: Database Of Human Structural Variants Enabling Vcf File Creation
12.3 years ago by Travis ★ 2.8k
2
votes
3
replies
4.0k
views
Database Of Human Structural Variants Enabling Vcf File Creation
next-gen vcf sv
updated 12.3 years ago by ★ 1.1k • written 12.3 years ago by ★ 2.8k
0
votes
0
replies
13k
views
Comment: C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
12.6 years ago by Travis ★ 2.8k
0
votes
0
replies
13k
views
Comment: C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
12.6 years ago by Travis ★ 2.8k
0
votes
2
replies
13k
views
Comment: C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
12.6 years ago by Travis ★ 2.8k
0
votes
2
replies
13k
views
Comment: C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
12.6 years ago by Travis ★ 2.8k
0
votes
1
reply
13k
views
Comment: C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
12.6 years ago by Travis ★ 2.8k
0
votes
0
replies
13k
views
Comment: C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
12.6 years ago by Travis ★ 2.8k
26
votes
30
replies
13k
views
9 follow
Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
perl python
updated 12.6 years ago by ▴ 900 • written 12.6 years ago by ★ 2.8k
0
votes
1
reply
13k
views
Comment: C: Trying To Understand A Simple Perl Vs Python Vs Sed Benchmark
12.6 years ago by Travis ★ 2.8k
0
votes
0
replies
3.4k
views
Comment: C: Gatk Snp Calling Test Set
12.6 years ago by Travis ★ 2.8k
11
votes
3
replies
4.8k
views
Filtering Ngs Genomic Alignments
next-gen sequencing alignment filter paired
updated 12.7 years ago by ★ 1.2k • written 13.5 years ago by ★ 2.8k
3
votes
10
replies
6.0k
views
Large Deletions With Bwa And Single End Reads
indel next-gen sequencing alignment bwa
updated 12.7 years ago by ★ 4.3k • written 13.0 years ago by ★ 2.8k
12
votes
4
replies
3.1k
views
Does Anyone Know Of A Publication Reviewing Snp/Indel Finding Algorithms For Ngs Data?
next-gen sequencing snp indel publication
updated 12.7 years ago by ▴ 760 • written 13.3 years ago by ★ 2.8k
2
votes
5
replies
3.2k
views
Software To Simulate Solid Colorspace Reads
simulation next-gen sequencing solid
updated 12.7 years ago by ▴ 920 • written 13.3 years ago by ★ 2.8k
2
votes
8
replies
5.3k
views
Confused By Wgsim Output
next-gen sequencing short samtools
12.7 years ago by Travis ★ 2.8k
7
votes
6
replies
3.1k
views
Read Generator With Clear Annotation Of Read Origin And Mutations
short next-gen sequencing simulation alignment
updated 12.7 years ago by 164k • written 13.3 years ago by ★ 2.8k
3
votes
0
replies
31k
views
Answer: A: Human Exome Capture Library Coordinates Download
12.7 years ago by Travis ★ 2.8k
0
votes
0
replies
11k
views
Comment: C: Introducing Known Mutations (From A Vcf) Into A Fasta File
12.8 years ago by Travis ★ 2.8k
0
votes
0
replies
11k
views
Comment: C: Introducing Known Mutations (From A Vcf) Into A Fasta File
12.8 years ago by Travis ★ 2.8k
1
vote
0
replies
4.2k
views
Comment: C: Vcf Files With (Simulated) Phenotypes For Association Studies
12.8 years ago by Travis ★ 2.8k
0
votes
0
replies
4.2k
views
Comment: C: Vcf Files With (Simulated) Phenotypes For Association Studies
12.8 years ago by Travis ★ 2.8k
153
votes
32
replies
9.3k
views
23 follow
Picking A Programming Language And Where To Begin
programming next-gen sequencing c subjective
updated 12.8 years ago by ▴ 60 • written 13.3 years ago by ★ 2.8k
0
votes
0
replies
2.6k
views
Comment: C: Using Bfast To Align Illumina Paired End Reads
12.9 years ago by Travis ★ 2.8k
244 results • Page 1 of 5
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