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12
votes
7
replies
9.0k
views
Gene ID mapping of Ensembl IDs
RNA-Seq gene ID ensembl
updated 2.5 years ago by ▴ 450 • written 8.8 years ago by ▴ 150
0
votes
2
replies
5.5k
views
Error using BLAST+
fasta uniprot blast protein
updated 2.3 years ago by 44k • written 8.9 years ago by ▴ 150
0
votes
1
reply
2.1k
views
Comment: C: automated blast and output
updated 4.9 years ago by 44k • written 8.8 years ago by ▴ 150
0
votes
0
replies
3.6k
views
Comment: C: Error when running MISO
updated 4.9 years ago by 44k • written 8.8 years ago by ▴ 150
0
votes
0
replies
1.9k
views
Comment: C: Parsing Description from NCBI Blast+
updated 4.9 years ago by 44k • written 8.9 years ago by ▴ 150
0
votes
1
reply
9.0k
views
Comment: C: Gene ID mapping of Ensembl IDs
updated 6.2 years ago by 44k • written 8.8 years ago by ▴ 150
0
votes
0
replies
1.7k
views
Conversion of CuffDiff Gene expression tracking file to EXPR
RNA-Seq ChIP-Seq cufflinks
updated 7.7 years ago by 20 • written 8.7 years ago by ▴ 150
0
votes
0
replies
2.5k
views
Comment: C: High p-values generated from CuffDiff
8.0 years ago by onspotproductions ▴ 150
0
votes
1
reply
2.5k
views
Comment: C: High p-values generated from CuffDiff
8.0 years ago by onspotproductions ▴ 150
0
votes
5
replies
2.5k
views
High p-values generated from CuffDiff
RNA-Seq differential expression cufflinks
updated 8.0 years ago by ★ 1.6k • written 8.0 years ago by ▴ 150
0
votes
0
replies
2.2k
views
Comment: C: Tool to identify group pair distance & other metrics from FASTQ files
8.0 years ago by onspotproductions ▴ 150
1
vote
4
replies
2.2k
views
Tool to identify group pair distance & other metrics from FASTQ files
RNA-Seq fastq metrics
updated 8.0 years ago by ▴ 40 • written 8.0 years ago by ▴ 150
2
votes
7
replies
6.0k
views
MACS2 Optimal parameter identification
ChIP-Seq clip-seq RNA-Seq peak calling
updated 8.1 years ago by 20 • written 8.7 years ago by ▴ 150
0
votes
1
reply
2.8k
views
generating CLS file for GSEA from Cuffdiff output
RNA-Seq differential expression GSEA
updated 8.3 years ago by • 0 • written 8.5 years ago by ▴ 150
0
votes
2
replies
3.6k
views
Error when running MISO
RNA-Seq splicing MISO isoform
updated 2.3 years ago by 44k • written 8.8 years ago by ▴ 150
3
votes
1
reply
2.5k
views
Answer: A: From cuffmerge to cuffdiff: What input for cuffdiff?
8.4 years ago by onspotproductions ▴ 150
0
votes
0
replies
2.0k
views
Merging MISO exon-centric output values according to gene
RNA-Seq MISO Splicing Bed
8.6 years ago by onspotproductions ▴ 150
0
votes
0
replies
1.6k
views
Comment: C: Methods to identify ORF from de novo assembly
8.6 years ago by onspotproductions ▴ 150
0
votes
2
replies
1.6k
views
Methods to identify ORF from de novo assembly
RNA-Seq Assembly blast
8.6 years ago by onspotproductions ▴ 150
0
votes
0
replies
17k
views
Comment: C: Annotating bed file with gene names
8.6 years ago by onspotproductions ▴ 150
0
votes
0
replies
17k
views
Comment: C: Annotating bed file with gene names
8.6 years ago by onspotproductions ▴ 150
8
votes
12
replies
17k
views
7 follow
Annotating bed file with gene names
RNA-Seq bed annotate gene
updated 8.6 years ago by ★ 2.5k • written 8.6 years ago by ▴ 150
0
votes
1
reply
2.1k
views
EMBOSS getORF not keeping trinity identifiers
RNA-Seq Assembly orf protein
8.6 years ago by onspotproductions ▴ 150
0
votes
1
reply
17k
views
Comment: C: Annotating bed file with gene names
8.6 years ago by onspotproductions ▴ 150
0
votes
0
replies
2.1k
views
Convert MISO chromosome location event name to gene symbol
MISO RNA-Seq rna-seq
8.6 years ago by onspotproductions ▴ 150
1
vote
1
reply
2.9k
views
Understanding MISO output
MISO RNA-Seq Splicing Expression
updated 8.6 years ago by 20 • written 8.7 years ago by ▴ 150
0
votes
0
replies
1.7k
views
Comment: C: Poster quality images of gapped read alignment
8.6 years ago by onspotproductions ▴ 150
1
vote
3
replies
1.7k
views
Significant difference between Grch37 and human_g1k_37
RNA-Seq alignment mapping
updated 8.6 years ago by 13k • written 8.6 years ago by ▴ 150
1
vote
0
replies
6.8k
views
Answer: A: Best strategy for de novo assembly with illumina reads ?
8.6 years ago by onspotproductions ▴ 150
0
votes
2
replies
1.7k
views
Poster quality images of gapped read alignment
RNA-Seq graphics images tophat
updated 8.6 years ago by 47k • written 8.6 years ago by ▴ 150
1
vote
1
reply
3.7k
views
Answer: A: Error while makeblastdb
8.7 years ago by onspotproductions ▴ 150
0
votes
0
replies
2.1k
views
Comment: C: Building small computing system for RNA-Seq
8.7 years ago by onspotproductions ▴ 150
0
votes
1
reply
2.1k
views
Comment: C: Building small computing system for RNA-Seq
8.7 years ago by onspotproductions ▴ 150
0
votes
4
replies
2.1k
views
Building small computing system for RNA-Seq
RNA-Seq server cluster mapping
updated 8.7 years ago by 147k • written 8.7 years ago by ▴ 150
0
votes
1
reply
2.3k
views
Comment: C: Identifying correct GTF file for use with Differential expression
8.7 years ago by onspotproductions ▴ 150
0
votes
1
reply
2.3k
views
Comment: C: Identifying correct GTF file for use with Differential expression
8.7 years ago by onspotproductions ▴ 150
0
votes
5
replies
2.3k
views
Identifying correct GTF file for use with Differential expression
RNA-Seq gtf Assembly mapping
8.7 years ago by onspotproductions ▴ 150
0
votes
0
replies
1.6k
views
Comment: C: BLAST+ Parsing query sequence definition
8.7 years ago by onspotproductions ▴ 150
0
votes
1
reply
1.6k
views
Comment: C: BLAST+ Parsing query sequence definition
8.7 years ago by onspotproductions ▴ 150
0
votes
1
reply
1.6k
views
Comment: C: BLAST+ Parsing query sequence definition
8.7 years ago by onspotproductions ▴ 150
0
votes
6
replies
1.6k
views
BLAST+ Parsing query sequence definition
RNA-Seq Assembly blast
updated 8.7 years ago by 147k • written 8.7 years ago by ▴ 150
0
votes
0
replies
3.9k
views
Answer: A: Gene Ontology without enrichment analysis
8.7 years ago by onspotproductions ▴ 150
0
votes
1
reply
6.0k
views
Comment: C: MACS2 Optimal parameter identification
8.7 years ago by onspotproductions ▴ 150
0
votes
1
reply
6.0k
views
Comment: C: MACS2 Optimal parameter identification
8.7 years ago by onspotproductions ▴ 150
0
votes
0
replies
1.8k
views
Comment: C: RUnning Cuffdiff on 2 conditions simultaneously
8.7 years ago by onspotproductions ▴ 150
1
vote
2
replies
1.8k
views
RUnning Cuffdiff on 2 conditions simultaneously
RNA-Seq differential expression Assembly
updated 8.7 years ago by 8.3k • written 8.7 years ago by ▴ 150
2
votes
2
replies
2.6k
views
Trinity assembly and ORF decoder issue
RNA-Seq decoder ORF trinity
updated 2.4 years ago by 44k • written 8.8 years ago by ▴ 150
0
votes
0
replies
2.6k
views
Comment: Comment: Trinity assembly and ORF decoder issue
8.8 years ago by onspotproductions ▴ 150
0
votes
0
replies
2.1k
views
Comment: C: automated blast and output
8.8 years ago by onspotproductions ▴ 150
1
vote
1
reply
2.1k
views
Comment: C: automated blast and output
8.8 years ago by onspotproductions ▴ 150
72 results • Page 1 of 2
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