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3
votes
1
reply
4.9k
views
Answer: A: change seq name in a fasta file with a dataframe
6.6 years ago by Chirag Parsania ★ 2.0k
1
vote
0
replies
14k
views
Comment: C: The fonts and size of a tree displayed by ggtree
6.6 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
5.3k
views
Comment: C: For a given set of NCBI taxonomy ids / species names, how to derive their specie
6.6 years ago by Chirag Parsania ★ 2.0k
2
votes
11
replies
3.3k
views
How to improve existing transcriptome annotation using cufflink protocol ?
Assembly transcriptome cufflink cuffmerge
updated 6.7 years ago by 7.0k • written 7.4 years ago by ★ 2.0k
1
vote
0
replies
2.7k
views
Comment: C: blastdbcmd taxonomy id conflict
6.8 years ago by Chirag Parsania ★ 2.0k
0
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2
replies
2.7k
views
Comment: C: blastdbcmd taxonomy id conflict
6.8 years ago by Chirag Parsania ★ 2.0k
0
votes
1
reply
2.7k
views
Comment: C: blastdbcmd taxonomy id conflict
6.8 years ago by Chirag Parsania ★ 2.0k
3
votes
8
replies
2.7k
views
blastdbcmd taxonomy id conflict
blastp localblast taxonomyid
updated 6.8 years ago by 15k • written 6.8 years ago by ★ 2.0k
0
votes
1
reply
1.9k
views
Comment: C: How to identify bacteria habitats by taxon id or its name
7.1 years ago by Chirag Parsania ★ 2.0k
0
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0
replies
1.9k
views
Comment: C: How to identify bacteria habitats by taxon id or its name
7.1 years ago by Chirag Parsania ★ 2.0k
2
votes
5
replies
1.9k
views
How to identify bacteria habitats by taxon id or its name
bacteria ecology habitats
updated 7.1 years ago by 11k • written 7.1 years ago by ★ 2.0k
0
votes
0
replies
4.4k
views
Comment: C: ggscatter two color issue
7.3 years ago by Chirag Parsania ★ 2.0k
1
vote
1
reply
4.4k
views
Answer: C: ggscatter two color issue
7.3 years ago by Chirag Parsania ★ 2.0k
1
vote
1
reply
2.3k
views
Answer: A: Computing 1Gc 2GC 3GC on any CDS
7.3 years ago by Chirag Parsania ★ 2.0k
1
vote
0
replies
1.7k
views
Comment: C: Automatic functional annotation of protein sequences
7.3 years ago by Chirag Parsania ★ 2.0k
1
vote
1
reply
4.6k
views
Comment: C: topGO: GO terms but no P-value score
7.3 years ago by Chirag Parsania ★ 2.0k
2
votes
1
reply
2.2k
views
Answer: A: How to interpret phylogenetic Dendrogram
7.3 years ago by Chirag Parsania ★ 2.0k
0
votes
1
reply
4.1k
views
Comment: C: local blastp against NR database
7.3 years ago by Chirag Parsania ★ 2.0k
0
votes
1
reply
4.1k
views
Comment: C: local blastp against NR database
7.3 years ago by Chirag Parsania ★ 2.0k
0
votes
2
replies
4.1k
views
Comment: A: local blastp against NR database
7.3 years ago by Chirag Parsania ★ 2.0k
5
votes
11
replies
4.1k
views
local blastp against NR database
blastp NR TIME
7.3 years ago by Chirag Parsania ★ 2.0k
1
vote
0
replies
1.6k
views
Answer: A: how to write scripts to split GO terms as one per line
7.3 years ago by Chirag Parsania ★ 2.0k
1
vote
0
replies
1.6k
views
Comment: C: Cuffdiff output file gene_exp.diff has "no" for all listed genes under "signific
7.3 years ago by Chirag Parsania ★ 2.0k
0
votes
1
reply
1.6k
views
Comment: C: Cuffdiff output file gene_exp.diff has "no" for all listed genes under "signific
7.4 years ago by Chirag Parsania ★ 2.0k
1
vote
0
replies
2.5k
views
Comment: C: Interpreting CummeRbund Expression plots
7.4 years ago by Chirag Parsania ★ 2.0k
1
vote
1
reply
2.5k
views
Comment: C: Interpreting CummeRbund Expression plots
7.4 years ago by Chirag Parsania ★ 2.0k
2
votes
1
reply
2.5k
views
Answer: A: Interpreting CummeRbund Expression plots
7.4 years ago by Chirag Parsania ★ 2.0k
1
vote
0
replies
1.4k
views
Answer: A: Tophat and Bowtie2
7.4 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
2.9k
views
Comment: C: GO enrichment - interpreting broad terms
7.4 years ago by Chirag Parsania ★ 2.0k
2
votes
1
reply
2.9k
views
Answer: A: GO enrichment - interpreting broad terms
7.4 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
11k
views
Comment: C: How To Programmatically Retrieve A Batch Of Fasta Sequences From For A List Of U
7.4 years ago by Chirag Parsania ★ 2.0k
0
votes
1
reply
3.8k
views
Comment: C: Heatmap for RNA-Seq data
7.4 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
1.2k
views
Answer: A: High FPKM values for bacterial genes
7.4 years ago by Chirag Parsania ★ 2.0k
0
votes
1
reply
2.6k
views
Comment: C: How to retrieve gene ID, gene description, after cuffdiff analysis
7.4 years ago by Chirag Parsania ★ 2.0k
1
vote
1
reply
2.6k
views
Answer: A: How to retrieve gene ID, gene description, after cuffdiff analysis
7.4 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
1.4k
views
Answer: A: how to get name column having more number of gene occurrence
7.4 years ago by Chirag Parsania ★ 2.0k
1
vote
0
replies
3.0k
views
Comment: C: Finding gene names of a fasta file contains gene sequences
7.4 years ago by Chirag Parsania ★ 2.0k
1
vote
1
reply
3.0k
views
Comment: C: Finding gene names of a fasta file contains gene sequences
7.4 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
3.3k
views
Comment: C: How to improve existing transcriptome annotation using cufflink protocol ?
7.4 years ago by Chirag Parsania ★ 2.0k
0
votes
1
reply
3.3k
views
Comment: C: How to improve existing transcriptome annotation using cufflink protocol ?
7.4 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
2.9k
views
Comment: C: How to find more than 'n %' overlapping ranges using GRanges package ?
7.4 years ago by Chirag Parsania ★ 2.0k
1
vote
2
replies
2.9k
views
How to find more than 'n %' overlapping ranges using GRanges package ?
R genomicRanges GRanges
7.4 years ago by Chirag Parsania ★ 2.0k
0
votes
1
reply
3.3k
views
Comment: C: How to improve existing transcriptome annotation using cufflink protocol ?
7.4 years ago by Chirag Parsania ★ 2.0k
3
votes
6
replies
1.8k
views
NR BLAST on AWS
blast amazone aws cloud
updated 7.5 years ago by 20 • written 7.5 years ago by ★ 2.0k
0
votes
1
reply
1.6k
views
Answer: A: simoultaneous chromatin + transcriptional profiling
7.5 years ago by Chirag Parsania ★ 2.0k
0
votes
0
replies
3.4k
views
Answer: A: Gene set enrichment analysis tools
7.5 years ago by Chirag Parsania ★ 2.0k
0
votes
1
reply
1.8k
views
Comment: A: NR BLAST on AWS
7.5 years ago by Chirag Parsania ★ 2.0k
0
votes
1
reply
1.8k
views
Comment: C: NR BLAST on AWS
7.5 years ago by Chirag Parsania ★ 2.0k
1
vote
11
replies
2.2k
views
Significant difference in H3 CHiP data of two conditions (P-value for skewed distribution)
statistics ChIP-Seq p-value h3 histone
7.5 years ago by Chirag Parsania ★ 2.0k
0
votes
1
reply
2.2k
views
Comment: C: Significant difference in H3 CHiP data of two conditions (P-value for skewed dis
7.5 years ago by Chirag Parsania ★ 2.0k
228 results • Page 4 of 5
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