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9
votes
4
replies
4.6k
views
GL000201,GL000202... etc What are these?
WGS ICGC BAM
updated 8.6 years ago by 13k • written 8.6 years ago by ▴ 560
0
votes
1
reply
2.4k
views
Comment: C: HOMER mergepeaks matrix interpreatation
8.6 years ago by morovatunc ▴ 560
1
vote
1
reply
1.9k
views
Mutational Calling with SomaticSeq
NGS somatic-mutations
updated 2.3 years ago by 44k • written 8.8 years ago by ▴ 560
2
votes
8
replies
2.4k
views
HOMER mergepeaks matrix interpreatation
ChIP-Seq
updated 8.6 years ago by 11k • written 8.6 years ago by ▴ 560
0
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0
replies
2.5k
views
Comment: C: Variant Calling output problem GL000 contigs
8.6 years ago by morovatunc ▴ 560
0
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1
reply
2.5k
views
Comment: C: Variant Calling output problem GL000 contigs
8.6 years ago by morovatunc ▴ 560
0
votes
2
replies
2.5k
views
Variant Calling output problem GL000 contigs
mutect vardict varscan freebayes
8.6 years ago by morovatunc ▴ 560
0
votes
0
replies
2.4k
views
Comment: C: HOMER mergepeaks matrix interpreatation
8.6 years ago by morovatunc ▴ 560
0
votes
2
replies
2.4k
views
Comment: C: HOMER mergepeaks matrix interpreatation
8.6 years ago by morovatunc ▴ 560
0
votes
0
replies
1.7k
views
Comment: C: CRISPR screen 0 count values
8.6 years ago by morovatunc ▴ 560
1
vote
2
replies
1.7k
views
CRISPR screen 0 count values
CRISPR-Screen
8.6 years ago by morovatunc ▴ 560
0
votes
0
replies
7.2k
views
Comment: C: New to BEDtools, can't get intersect to work
8.6 years ago by morovatunc ▴ 560
1
vote
1
reply
7.2k
views
Comment: C: New to BEDtools, can't get intersect to work
8.6 years ago by morovatunc ▴ 560
1
vote
1
reply
7.2k
views
Answer: A: New to BEDtools, can't get intersect to work
8.6 years ago by morovatunc ▴ 560
1
vote
0
replies
1.1k
views
Predicting gene expression of a cancer from the expression of subset
RNA-Seq
8.6 years ago by morovatunc ▴ 560
0
votes
1
reply
11k
views
Comment: C: Kallisto New RNA-seq quantification method discussion
8.6 years ago by morovatunc ▴ 560
0
votes
1
reply
11k
views
Comment: C: Kallisto New RNA-seq quantification method discussion
8.6 years ago by morovatunc ▴ 560
0
votes
0
replies
1.7k
views
HOMER mergePeaks --matrix output?
ChIP-Seq
8.6 years ago by morovatunc ▴ 560
0
votes
0
replies
1.9k
views
Comment: C: Interpreting 2 RNA-seq data with different lengths
8.7 years ago by morovatunc ▴ 560
0
votes
1
reply
1.9k
views
Comment: C: Interpreting 2 RNA-seq data with different lengths
8.7 years ago by morovatunc ▴ 560
1
vote
4
replies
1.9k
views
Interpreting 2 RNA-seq data with different lengths
RNA-Seq DEseq
updated 8.7 years ago by 6.6k • written 8.7 years ago by ▴ 560
0
votes
1
reply
2.5k
views
VarDictJava BED file input Problem
VarDict WGS
updated 3.2 years ago by 44k • written 8.8 years ago by ▴ 560
0
votes
2
replies
3.0k
views
TCGA RNAseq normal and tumor samples problem
RNA-Seq TCGA
updated 8.7 years ago by 8.3k • written 8.7 years ago by ▴ 560
0
votes
1
reply
4.9k
views
Answer: A: Making a mac book Bioinfo ready (El Capitan)
8.7 years ago by morovatunc ▴ 560
0
votes
1
reply
3.9k
views
Comment: Comment: ICGC Variant Calling Pipelines
updated 2.4 years ago by 44k • written 8.8 years ago by ▴ 560
8
votes
4
replies
3.9k
views
ICGC Variant Calling Pipelines
Mutation-Calling ICGC
updated 2.4 years ago by 44k • written 8.8 years ago by ▴ 560
1
vote
1
reply
6.9k
views
Comment: C: Chip-Seq Peak hight difference between BED and BW file formats.
8.9 years ago by morovatunc ▴ 560
0
votes
0
replies
1.9k
views
Comment: C: About Dream Challenge Somatic Mutation Calling Algorithms
8.9 years ago by morovatunc ▴ 560
0
votes
2
replies
1.9k
views
About Dream Challenge Somatic Mutation Calling Algorithms
Somatic-Mutations SNV DREAM
updated 2.3 years ago by 44k • written 8.9 years ago by ▴ 560
0
votes
0
replies
9.8k
views
Comment: C: HOMER find motifs from BED data
8.9 years ago by morovatunc ▴ 560
0
votes
0
replies
2.5k
views
HOMER mergePeaks -d value definition
ChIP-Seq HOMER
updated 2.3 years ago by 44k • written 8.9 years ago by ▴ 560
0
votes
0
replies
2.1k
views
Comment: C: Eland format to Bed format?
9.0 years ago by morovatunc ▴ 560
1
vote
2
replies
2.1k
views
Eland format to Bed format?
ChIP-Seq GEO BED
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 560
0
votes
4
replies
3.6k
views
Homer mergePeaks : Cannot calculate the mean of overlapped peaks
ChIP-Seq Homer
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 560
0
votes
0
replies
5.9k
views
Answer: A: liftOver error: not reading the coordinate position correctly?
9.0 years ago by morovatunc ▴ 560
0
votes
0
replies
1.8k
views
Comment: C: What is the best way to start coding genomics tools?
9.0 years ago by morovatunc ▴ 560
1
vote
4
replies
1.8k
views
Forum: What is the best way to start coding genomics tools?
python indel genomic-tools
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 560
0
votes
0
replies
7.3k
views
Comment: C: Finding Chip Seq Overlaps with Bed files
9.0 years ago by morovatunc ▴ 560
0
votes
0
replies
7.3k
views
Comment: Comment: Finding Chip Seq Overlaps with Bed files
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 560
0
votes
0
replies
2.5k
views
Comment: Comment: What statistical test should I apply to prove my high confidence values are part
9.0 years ago by morovatunc ▴ 560
1
vote
6
replies
2.5k
views
What statistical test should I apply to prove my high confidence values are part of low confidence values?
chip-seq bed
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 560
0
votes
0
replies
2.1k
views
Comment: C: Differential Gene Expression Analysis with NimbleGen microarrays
9.0 years ago by morovatunc ▴ 560
0
votes
0
replies
1.6k
views
CGhub Whole Genome Sequencing Data sequencing info
WGS cghub TGCA
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 560
0
votes
1
reply
2.1k
views
Answer: A: Differential Gene Expression Analysis with NimbleGen microarrays
9.1 years ago by morovatunc ▴ 560
0
votes
0
replies
2.2k
views
CrossMap Genome Coordinate Converter, Start Location is further than End location Problem
hg18 crossmap genome-coordinates hg19
updated 2.3 years ago by 44k • written 9.1 years ago by ▴ 560
2
votes
8
replies
2.9k
views
multiIntersectBed How can I implement chip seq peak values with the overlaps?
ChIP-Seq bedtools
updated 2.3 years ago by 44k • written 9.1 years ago by ▴ 560
0
votes
0
replies
9.9k
views
Comment: C: Overlapping And Unique Peaks In Chipseq
9.1 years ago by morovatunc ▴ 560
0
votes
0
replies
4.5k
views
Comment: C: IGV peak Visualation Problem
9.1 years ago by morovatunc ▴ 560
0
votes
1
reply
3.1k
views
Comment: C: Chip Seq Peaks/ Enrichment Profilig?
9.1 years ago by morovatunc ▴ 560
2
votes
5
replies
3.1k
views
Chip Seq Peaks/ Enrichment Profilig?
next-gen ChIP-Seq seq
updated 2.2 years ago by 44k • written 9.1 years ago by ▴ 560
207 results • Page 4 of 5
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