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0
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11k
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Comment: C: Add contig lenght to VCF header in a robust way
5.3 years ago by Shicheng Guo ★ 9.6k
0
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0
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18k
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Comment: C: TSS file for hg19
5.3 years ago by Shicheng Guo ★ 9.6k
2
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2
replies
18k
views
Answer: A: TSS file for hg19
5.3 years ago by Shicheng Guo ★ 9.6k
0
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0
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2.9k
views
Comment: C: Whole Blood Samples of Cancer Patients from TCGA?
5.3 years ago by Shicheng Guo ★ 9.6k
0
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0
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1.7k
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Comment: C: TCGA survival analysis using >100 genes
5.3 years ago by Shicheng Guo ★ 9.6k
0
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2
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1.7k
views
Comment: C: TCGA survival analysis using >100 genes
5.3 years ago by Shicheng Guo ★ 9.6k
0
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1
reply
46k
views
Comment: A: Snakemake vs. Nextflow: strengths and weaknesses
5.3 years ago by Shicheng Guo ★ 9.6k
0
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1
reply
927
views
Which open source software to replace IMGT/V-QUEST
IMGT V-QUEST
5.3 years ago by Shicheng Guo ★ 9.6k
0
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0
replies
1.1k
views
How to calculate "expected loss-of-function variants" for a gene
O/E LoF Gnomad
updated 5.3 years ago by 20 • written 5.5 years ago by ★ 9.6k
0
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0
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2.3k
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Comment: C: BSP Primers Alignment Option Optimization (Bismark)
5.3 years ago by Shicheng Guo ★ 9.6k
0
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0
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5.3k
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Comment: C: Length Of The Vdj Segment In B Cells
5.3 years ago by Shicheng Guo ★ 9.6k
1
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1
reply
2.4k
views
Comment: C: WGBS alignment with BitMapperBS
5.4 years ago by Shicheng Guo ★ 9.6k
1
vote
1
reply
2.3k
views
gdc-client download: ERROR: Max retries exceeded
gdc-client gdc
updated 20 months ago by 44k • written 5.4 years ago by ★ 9.6k
1
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1
reply
2.4k
views
Comment: C: WGBS alignment with BitMapperBS
5.4 years ago by Shicheng Guo ★ 9.6k
14
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10
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2.4k
views
Forum: WGBS alignment with BitMapperBS
BitMapperBS bismark
updated 18 months ago by 44k • written 5.4 years ago by ★ 9.6k
0
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1
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1.7k
views
Comment: C: Is it possible to generate a single maf file from multiple vcf files using vcf2m
5.4 years ago by Shicheng Guo ★ 9.6k
0
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0
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2.9k
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Comment: C: generate oncoprint from input VCF file
5.4 years ago by Shicheng Guo ★ 9.6k
0
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0
replies
1.1k
views
Comment: C: where can I download the gold standard datasets with validated and accurate tumo
5.4 years ago by Shicheng Guo ★ 9.6k
1
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1
reply
1.5k
views
Comment: C: Extracting super-population allele frequencies from 1000 genomes (phase 3) data
5.4 years ago by Shicheng Guo ★ 9.6k
1
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2
replies
1.2k
views
bcftools view: index -R not better than -T
bcftools -R -T
5.4 years ago by Shicheng Guo ★ 9.6k
1
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1
reply
7.2k
views
Comment: C: How to do data cleaning for VCF genetic file
5.4 years ago by Shicheng Guo ★ 9.6k
0
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0
replies
5.1k
views
Comment: C: pathogenicity predictors of cancer mutations
5.4 years ago by Shicheng Guo ★ 9.6k
0
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2
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5.1k
views
Comment: C: pathogenicity predictors of cancer mutations
5.4 years ago by Shicheng Guo ★ 9.6k
0
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0
replies
7.2k
views
Comment: C: How to do data cleaning for VCF genetic file
5.4 years ago by Shicheng Guo ★ 9.6k
0
votes
1
reply
7.2k
views
Comment: C: How to do data cleaning for VCF genetic file
5.4 years ago by Shicheng Guo ★ 9.6k
1
vote
1
reply
7.2k
views
Comment: C: How to do data cleaning for VCF genetic file
5.4 years ago by Shicheng Guo ★ 9.6k
0
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1
reply
7.2k
views
Comment: C: How to do data cleaning for VCF genetic file
5.4 years ago by Shicheng Guo ★ 9.6k
0
votes
0
replies
7.2k
views
Comment: C: How to do data cleaning for VCF genetic file
5.4 years ago by Shicheng Guo ★ 9.6k
2
votes
0
replies
9.9k
views
Answer: A: illumina EPIC array support by R packages?
5.4 years ago by Shicheng Guo ★ 9.6k
1
vote
1
reply
10k
views
Answer: A: how to switch REF and ALT alleles in VCF files if the REF is incorrect according
5.4 years ago by Shicheng Guo ★ 9.6k
0
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0
replies
10k
views
Comment: C: how to switch REF and ALT alleles in VCF files if the REF is incorrect according
updated 5.4 years ago by 44k • written 5.4 years ago by ★ 9.6k
0
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1
reply
5.1k
views
Comment: C: Keep Format and Individual fields when annotating VCF with VEP
5.4 years ago by Shicheng Guo ★ 9.6k
0
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0
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1.5k
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Comment: C: vcftools merge: Incorrect number of F1R2 fields (2) at chr12:29486505, cannot me
5.4 years ago by Shicheng Guo ★ 9.6k
0
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1
reply
1.8k
views
Comment: C: How to clean this strange VCF file?
5.4 years ago by Shicheng Guo ★ 9.6k
4
votes
4
replies
1.5k
views
vcftools merge: Incorrect number of F1R2 fields (2) at chr12:29486505, cannot merge.
SNP vcftools merge F1R2
5.4 years ago by Shicheng Guo ★ 9.6k
0
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0
replies
3.8k
views
Comment: C: bcftools consensus error
5.4 years ago by Shicheng Guo ★ 9.6k
2
votes
4
replies
1.8k
views
How to clean this strange VCF file?
SNP vcf
5.4 years ago by Shicheng Guo ★ 9.6k
0
votes
1
reply
1.2k
views
Which database can be used to identify canonical splice site altering for ANNOVAR?
annovar splice site
updated 3.4 years ago by ▴ 50 • written 5.5 years ago by ★ 9.6k
3
votes
0
replies
4.4k
views
Answer: A: error in running R
updated 5.5 years ago by 44k • written 9.1 years ago by ★ 9.6k
0
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1
reply
6.1k
views
Comment: C: Tool to fix reference allele nucleotide in vcf
5.5 years ago by Shicheng Guo ★ 9.6k
0
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1
reply
6.1k
views
Comment: C: Tool to fix reference allele nucleotide in vcf
5.5 years ago by Shicheng Guo ★ 9.6k
0
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1
reply
6.1k
views
Comment: C: Tool to fix reference allele nucleotide in vcf
5.5 years ago by Shicheng Guo ★ 9.6k
0
votes
1
reply
5.6k
views
Answer: A: Can someone help me with imputation of missing SNPs using beagle 4?
5.5 years ago by Shicheng Guo ★ 9.6k
0
votes
0
replies
1.4k
views
Beagle phasing without map and reference parameters
beagle map reference
5.5 years ago by Shicheng Guo ★ 9.6k
0
votes
0
replies
8.5k
views
Comment: C: Beagle imputation results quality control
5.5 years ago by Shicheng Guo ★ 9.6k
0
votes
1
reply
3.5k
views
Answer: A: Search Hgmd By Accession
5.5 years ago by Shicheng Guo ★ 9.6k
0
votes
1
reply
18k
views
Comment: C: Where Can I Download The Public Version Of The The Human Gene Mutation Database
5.5 years ago by Shicheng Guo ★ 9.6k
2
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1
reply
2.9k
views
Answer: A: Question on SnpSift Filter
5.5 years ago by Shicheng Guo ★ 9.6k
0
votes
0
replies
8.5k
views
Comment: C: Beagle imputation results quality control
5.5 years ago by Shicheng Guo ★ 9.6k
2
votes
1
reply
2.6k
views
beagle running error: Insufficient space for shared memory file
beagle
5.5 years ago by Shicheng Guo ★ 9.6k
854 results • Page 7 of 18
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