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19
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Differences between trimming tools: cutadapt, bbduk and sickle
sickle cutadapt trimming bbduk
7.6 years ago by rioualen ▴ 750
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Comment: C: Differences between trimming tools: cutadapt, bbduk and sickle
7.6 years ago by rioualen ▴ 750
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1
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14k
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Comment: C: Differences between trimming tools: cutadapt, bbduk and sickle
7.6 years ago by rioualen ▴ 750
3
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14k
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Answer: C: Differences between cutadapt and sickle?
7.6 years ago by rioualen ▴ 750
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14k
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Comment: C: Differences between cutadapt and sickle?
7.6 years ago by rioualen ▴ 750
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2
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14k
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Comment: C: Differences between cutadapt and sickle?
7.6 years ago by rioualen ▴ 750
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Comment: C: How to remove adaptors if you don't know their names/sequences? (eg from public
7.6 years ago by rioualen ▴ 750
2
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2
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3.4k
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How to remove adaptors if you don't know their names/sequences? (eg from public data)
adaptors ngs trimming cutadapt trimmomatic
updated 7.6 years ago by ★ 5.2k • written 7.6 years ago by ▴ 750
0
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2.9k
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Get fastq/sra from ArrayExpress and/or GEO programmatically for specific organism/experiment type
arrayexpress fastq sra geo
7.9 years ago by rioualen ▴ 750
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Comment: C: sra to fastq conversion - paired-end file won't split
7.9 years ago by rioualen ▴ 750
0
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1
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2.5k
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Comment: C: sra to fastq conversion - paired-end file won't split
7.9 years ago by rioualen ▴ 750
1
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6
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2.5k
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sra to fastq conversion - paired-end file won't split
fastq sra fastq-dump sratoolkit
7.9 years ago by rioualen ▴ 750
0
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1
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2.5k
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Comment: C: sra to fastq conversion - paired-end file won't split
7.9 years ago by rioualen ▴ 750
0
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1
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4.0k
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Comment: C: Merge bed files, keep the peak count
8.4 years ago by rioualen ▴ 750
2
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0
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4.0k
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Comment: C: Merge bed files, keep the peak count
8.4 years ago by rioualen ▴ 750
1
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4
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2.4k
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Is there a simple way to get the max coverage of a bedgraph file in python?
python bedgraph
updated 8.7 years ago by 35k • written 8.7 years ago by ▴ 750
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Answer: A: Is there a simple way to get the max coverage of a bedgraph file in python?
8.7 years ago by rioualen ▴ 750
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2.4k
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Comment: C: Is there a simple way to get the max coverage of a bedgraph file in python?
8.7 years ago by rioualen ▴ 750
0
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0
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2.5k
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Comment: C: recentering peaks on the center of motif
8.8 years ago by rioualen ▴ 750
0
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0
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46k
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Comment: C: Get chromosome sizes from fasta file
8.8 years ago by rioualen ▴ 750
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0
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15k
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Answer: A: Best Graphics Gallery Or Blogs For Bioinformatics Use
8.9 years ago by rioualen ▴ 750
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1
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4.1k
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Answer: A: RNA to protein in bash?
8.9 years ago by rioualen ▴ 750
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4.0k
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Comment: C: Looking for ways to download ChIP-seq datasets programmatically in a pipeline
8.9 years ago by rioualen ▴ 750
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0
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4.0k
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Comment: C: Looking for ways to download ChIP-seq datasets programmatically in a pipeline
8.9 years ago by rioualen ▴ 750
7
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10
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4.0k
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Looking for ways to download ChIP-seq datasets programmatically in a pipeline
GEO ChIP-Seq next-gen
updated 8.9 years ago by 7.8k • written 8.9 years ago by ▴ 750
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0
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2.2k
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Comment: C: Get chromosome name from RefSeq format for C.elegans
9.3 years ago by rioualen ▴ 750
1
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1
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2.2k
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Answer: Answer: About Gene Transcriptional Regulatory Network
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 750
1
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0
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2.2k
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Answer: A: Get chromosome name from RefSeq format for C.elegans
9.3 years ago by rioualen ▴ 750
2
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3
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2.2k
views
Get chromosome name from RefSeq format for C.elegans
ChIP-Seq Refseq
9.3 years ago by rioualen ▴ 750
79 results • Page 2 of 2
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