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Answer: Answer: How to filter and keep longest isoform per gene in gff3 file ?
5 days ago by Alex Reynolds 36k
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260
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Answer: Answer: mappability regions
28 days ago by Alex Reynolds 36k
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757
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Comment: Comment: ATAC-seq peaks centered between TSS and TES
6 weeks ago by Alex Reynolds 36k
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946
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Comment: Comment: A simple and lightweight tool for filtering csv file wirtten in Rust
8 weeks ago by Alex Reynolds 36k
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436
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Comment: Comment: Programmatic JS ways to get interesting information about genes by symbol or acc
4 months ago by Alex Reynolds 36k
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2
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436
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Programmatic JS ways to get interesting information about genes by symbol or accession ID
javascript metadata gene annotation
4 months ago by Alex Reynolds 36k
2
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0
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477
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Answer: Answer: Maximum bits in ggseqlogo is less then 2?
5 months ago by Alex Reynolds 36k
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305
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Automated methods for comparing trees
distance agglomerative compare tree
updated 5 months ago by ★ 28k • written 5 months ago by 36k
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1.4k
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Comment: Comment: Create a new bed file with all pairwise combinations between two other bed files
6 months ago by Alex Reynolds 36k
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1.1k
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Comment: Comment: Overlapping Ranges within Granges object
6 months ago by Alex Reynolds 36k
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1.1k
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Answer: Answer: Overlapping Ranges within Granges object
6 months ago by Alex Reynolds 36k
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637
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Comment: Comment: Bedtools merge minimum overlap?
6 months ago by Alex Reynolds 36k
2
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2
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1.4k
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Answer: Answer: Create a new bed file with all pairwise combinations between two other bed files
7 months ago by Alex Reynolds 36k
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1
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3.4k
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Comment: Comment: Bioinformatician who was retaliated against after reporting discriminatory haras
7 months ago by Alex Reynolds 36k
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468
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Answer: Answer: How to highlight genes on genome visual reprezentation/what tool to use?
7 months ago by Alex Reynolds 36k
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8.2k
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Comment: Comment: Intersect multiple BED files
8 months ago by Alex Reynolds 36k
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1
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686
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Comment: Comment: Coverage depth map of genome from multiple sample coverage bedgraphs?
8 months ago by Alex Reynolds 36k
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558
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Answer: Answer: Error occurs when migrate-n software performs "make mpis"
8 months ago by Alex Reynolds 36k
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1
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686
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Comment: Comment: Coverage depth map of genome from multiple sample coverage bedgraphs?
8 months ago by Alex Reynolds 36k
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1
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686
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Answer: Answer: Coverage depth map of genome from multiple sample coverage bedgraphs?
8 months ago by Alex Reynolds 36k
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1.6k
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Answer: Answer: Convert Gene symbol to Ensembl ID
8 months ago by Alex Reynolds 36k
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665
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Comment: Comment: Genes with multiple chromosome locations
8 months ago by Alex Reynolds 36k
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1
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1.6k
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Comment: Comment: Convert Gene symbol to Ensembl ID
8 months ago by Alex Reynolds 36k
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1
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1.6k
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Comment: Comment: Convert Gene symbol to Ensembl ID
8 months ago by Alex Reynolds 36k
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19k
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Comment: Comment: BEDOPS gtf2bed conversion error with Ensembl GTF
9 months ago by Alex Reynolds 36k
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786
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Comment: Comment: line 164: 15342 Segmentation fault (core dumped) ${cmd} ${options} - 0<&0
9 months ago by Alex Reynolds 36k
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786
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Answer: Answer: line 164: 15342 Segmentation fault (core dumped) ${cmd} ${options} - 0<&0
9 months ago by Alex Reynolds 36k
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1.3k
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Comment: Comment: Random Access remote BAM files
9 months ago by Alex Reynolds 36k
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1
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1.3k
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Comment: Comment: Random Access remote BAM files
9 months ago by Alex Reynolds 36k
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1
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1.3k
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Comment: Comment: Random Access remote BAM files
9 months ago by Alex Reynolds 36k
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1
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1.3k
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Answer: Answer: Random Access remote BAM files
9 months ago by Alex Reynolds 36k
2
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1
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730
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Answer: Answer: Double counts with bedtools intersect?
10 months ago by Alex Reynolds 36k
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0
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1.9k
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Comment: Comment: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
10 months ago by Alex Reynolds 36k
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1
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1.9k
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Comment: Comment: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
10 months ago by Alex Reynolds 36k
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1
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1.9k
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Answer: Answer: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
10 months ago by Alex Reynolds 36k
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496
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Answer: Answer: identify genes
10 months ago by Alex Reynolds 36k
1
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2
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2.5k
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Comment: Comment: PanDepth, an ultra-fast and efficient genomic tool for coverage calculation
11 months ago by Alex Reynolds 36k
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855
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Comment: Comment: Where can I get a list of SNPs mapping overlapping genes in humans?
11 months ago by Alex Reynolds 36k
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855
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Comment: Comment: Where can I get a list of SNPs mapping overlapping genes in humans?
11 months ago by Alex Reynolds 36k
3
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2
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855
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Answer: Answer: Where can I get a list of SNPs mapping overlapping genes in humans?
11 months ago by Alex Reynolds 36k
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1
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5.4k
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Comment: Comment: Decoding MM and ML tags in .SAM file
12 months ago by Alex Reynolds 36k
1
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1.1k
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Answer: Answer: Filter a BED file based on genome coordinates for gene names
12 months ago by Alex Reynolds 36k
1
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0
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581
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Answer: Answer: distance between chip peaks and individual TSS
12 months ago by Alex Reynolds 36k
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0
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837
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Answer: Answer: Simple tools for creation of figures of gene and protein structure
12 months ago by Alex Reynolds 36k
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0
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740
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Answer: Answer: Visualize raw rna fastq file and aligned bam file
13 months ago by Alex Reynolds 36k
1
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1
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8.7k
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Comment: Comment: Macbook M1 pro/M2 pro or Dell (with Ubuntu/other linux distribution) for bioinfo
13 months ago by Alex Reynolds 36k
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1
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1.7k
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Comment: Comment: Getting the overlap between two GTF files
13 months ago by Alex Reynolds 36k
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1
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1.7k
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Comment: Comment: Getting the overlap between two GTF files
13 months ago by Alex Reynolds 36k
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0
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1.7k
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Answer: Answer: Getting the overlap between two GTF files
13 months ago by Alex Reynolds 36k
1
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1
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997
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Comment: Comment: Mapping SNP rsIds/ positions to genes coding for proteins
14 months ago by Alex Reynolds 36k
2,885 results • Page 1 of 58
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