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995
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Answer: Answer: Mapping SNP rsIds/ positions to genes coding for proteins
14 months ago by Alex Reynolds 36k
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1.0k
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Answer: Answer: BED files
14 months ago by Alex Reynolds 36k
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1
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1.3k
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Comment: Comment: Filter human transcription factors
14 months ago by Alex Reynolds 36k
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1
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2.5k
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Comment: Comment: Read block operation failed with BAM file
14 months ago by Alex Reynolds 36k
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0
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602
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Answer: Answer: Visualize where kmers are on a reference genome
14 months ago by Alex Reynolds 36k
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0
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2.5k
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Comment: Comment: Read block operation failed with BAM file
14 months ago by Alex Reynolds 36k
2
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8
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2.5k
views
Read block operation failed with BAM file
bgzip samtools bam pysam htslib
updated 14 months ago by 3.1k • written 14 months ago by 36k
2
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0
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942
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Answer: Answer: Create 10,000bp windows for a SNP file and assign each SNP to its respective win
14 months ago by Alex Reynolds 36k
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2.5k
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Comment: Comment: Read block operation failed with BAM file
14 months ago by Alex Reynolds 36k
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2.3k
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Comment: Comment: bedops alternative for bedtools -unionbedg ?
14 months ago by Alex Reynolds 36k
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0
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2.3k
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Comment: Comment: bedops alternative for bedtools -unionbedg ?
14 months ago by Alex Reynolds 36k
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2
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2.3k
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Comment: Comment: bedops alternative for bedtools -unionbedg ?
14 months ago by Alex Reynolds 36k
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1
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1.4k
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Comment: Comment: Neither pysam nor samtools reading HTTPS-sourced BAM file correctly
14 months ago by Alex Reynolds 36k
3
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5
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1.4k
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Neither pysam nor samtools reading HTTPS-sourced BAM file correctly
bam pysam samtools
updated 14 months ago by 101k • written 14 months ago by 36k
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4.3k
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Comment: Comment: Reproduce the article "The complete sequence of a human genome."
14 months ago by Alex Reynolds 36k
5
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2
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4.3k
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Answer: Answer: Reproduce the article "The complete sequence of a human genome."
14 months ago by Alex Reynolds 36k
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0
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2.3k
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Comment: Comment: bedops alternative for bedtools -unionbedg ?
14 months ago by Alex Reynolds 36k
3
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2
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2.3k
views
Answer: Answer: bedops alternative for bedtools -unionbedg ?
14 months ago by Alex Reynolds 36k
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1
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1.8k
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Answer: Answer: Is Bioinformatics a Professional Degree?
15 months ago by Alex Reynolds 36k
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0
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1.3k
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Answer: Answer: Scanning a genomic region for TFBS
15 months ago by Alex Reynolds 36k
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0
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869
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Answer: Answer: Identify binding motifs within large super enhancer region
16 months ago by Alex Reynolds 36k
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0
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1.9k
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Comment: Comment: What happens when a bioinformatician has his own genome sequenced for $300?
17 months ago by Alex Reynolds 36k
5
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0
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1.9k
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Comment: Comment: What happens when a bioinformatician has his own genome sequenced for $300?
17 months ago by Alex Reynolds 36k
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0
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1.1k
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Answer: Answer: BED files
17 months ago by Alex Reynolds 36k
0
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0
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5.4k
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Comment: Comment: Decoding MM and ML tags in .SAM file
17 months ago by Alex Reynolds 36k
1
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1
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848
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Answer: Answer: how to intersect multiple bed files and get results in uncollapsed genomic inter
17 months ago by Alex Reynolds 36k
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0
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433
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LAD/TAD and recombination hotspot data
hotspot recombination lad tad
18 months ago by Alex Reynolds 36k
5
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2
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5.4k
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Answer: Answer: Decoding MM and ML tags in .SAM file
16 months ago by Alex Reynolds 36k
3
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4
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1.1k
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Fast BAM header editing
bam
updated 18 months ago by ★ 4.0k • written 18 months ago by 36k
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0
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1.1k
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Comment: Comment: Fast BAM header editing
18 months ago by Alex Reynolds 36k
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1
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2.2k
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Comment: Comment: Finding TF motifs enriched in series of ATAC-seq peaks (using fimo?)
18 months ago by Alex Reynolds 36k
1
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1
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2.2k
views
Comment: Comment: Finding TF motifs enriched in series of ATAC-seq peaks (using fimo?)
18 months ago by Alex Reynolds 36k
1
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1
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2.2k
views
Answer: Answer: Finding TF motifs enriched in series of ATAC-seq peaks (using fimo?)
18 months ago by Alex Reynolds 36k
0
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1
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805
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Answer: Answer: Does it possible to know what are the adjacent genes up to 1000bp upstream and
20 months ago by Alex Reynolds 36k
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1
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2.8k
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Comment: Comment: gtf2bed not converting to bed
20 months ago by Alex Reynolds 36k
1
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1
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2.8k
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Comment: Comment: gtf2bed not converting to bed
20 months ago by Alex Reynolds 36k
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2
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2.8k
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Comment: Comment: gtf2bed not converting to bed
20 months ago by Alex Reynolds 36k
2
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0
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2.8k
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Answer: Answer: gtf2bed not converting to bed
20 months ago by Alex Reynolds 36k
1
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0
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726
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Answer: Answer: How do you get functional/biological role of motifs?
22 months ago by Alex Reynolds 36k
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0
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1.3k
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Comment: Comment: Merging and intersecting genomic ranges for an indefinite number of files
23 months ago by Alex Reynolds 36k
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0
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1.3k
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Answer: Answer: Merging and intersecting genomic ranges for an indefinite number of files
23 months ago by Alex Reynolds 36k
0
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1
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1.3k
views
Answer: Answer: Merging and intersecting genomic ranges for an indefinite number of files
23 months ago by Alex Reynolds 36k
2
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1
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1.1k
views
Answer: Answer: How can I use nohup command when filtering SNPs?
23 months ago by Alex Reynolds 36k
1
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0
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1.6k
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Answer: Answer: Bedtools merge but only if intersection exists
24 months ago by Alex Reynolds 36k
0
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0
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632
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Comment: Comment: trackBrowser: Visualization of sequencing data within a given genome region
2.1 years ago by Alex Reynolds 36k
0
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0
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13k
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Comment: Comment: Laptops for bioinformatics
2.1 years ago by Alex Reynolds 36k
1
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1
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2.0k
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Comment: Comment: How to find overlapping regions in a single bed file
2.2 years ago by Alex Reynolds 36k
1
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1
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2.0k
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Answer: Answer: How to find overlapping regions in a single bed file
2.2 years ago by Alex Reynolds 36k
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0
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1.2k
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Comment: Comment: Unable to install bedops and bedtools on windows 11
2.3 years ago by Alex Reynolds 36k
0
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0
replies
2.1k
views
Comment: Comment: Count regions that overlap with python
2.3 years ago by Alex Reynolds 36k
2,885 results • Page 2 of 58
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