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347
votes
94
replies
252k
views
59 follow
Tools To Calculate Average Coverage For A Bam File?
coverage bam sequencing
updated 3 months ago by 147k • written 13.8 years ago by 5.0k
124
votes
13
replies
180k
views
13 follow
How Can I Convert Bam To Sam?
bam next-gen-sequencing sam
updated 15 months ago by 44k • written 14.4 years ago by 5.0k
2
votes
2
replies
3.0k
views
What Is The Best Tool To Detect Ibd In A Trio (Mom, Dad, Child)
snp
updated 5.0 years ago by 8.3k • written 13.2 years ago by 5.0k
0
votes
0
replies
4.2k
views
Comment: C: Affy Data Into Illumina Genome Studio
updated 5.3 years ago by 44k • written 14.5 years ago by 5.0k
42
votes
6
replies
26k
views
6 follow
Can You Please Tell Me Where I Find Information About .Fai File Format?
maf gatk
updated 5.3 years ago by 3.1k • written 14.5 years ago by 5.0k
9
votes
2
replies
2.7k
views
What would be the expected average coverage of a 384 multiplexed run on a Novaseq S4 flowcell?
novaseq coverage
updated 6.0 years ago by 85k • written 6.0 years ago by 5.0k
0
votes
2
replies
3.1k
views
Is it possible to multiplex mora than 384 samples on Novaseq 6000 for a very low pass (0.5-10x) WGS?
WGS Novaseq
6.0 years ago by Biomed 5.0k
11
votes
0
replies
125k
views
Answer: A: Where Can I Download Human Reference Genome In Fasta Format? Hgref.Fa File
updated 6.2 years ago by 44k • written 14.4 years ago by 5.0k
2
votes
0
replies
125k
views
Comment: C: Where Can I Download Human Reference Genome In Fasta Format? Hgref.Fa File
updated 6.2 years ago by 44k • written 14.4 years ago by 5.0k
8
votes
4
replies
4.0k
views
Dbsnp Genotypes Confusion
dbsnp genotyping
updated 6.2 years ago by 44k • written 14.4 years ago by 5.0k
0
votes
3
replies
4.8k
views
Answer: A: Convert Amos Bank To Ace File
updated 6.2 years ago by 44k • written 14.4 years ago by 5.0k
0
votes
1
reply
2.3k
views
Comment: C: Is Clinvar the most comprehensive and reliable source of disease-causing genes a
6.3 years ago by Biomed 5.0k
5
votes
6
replies
2.3k
views
Is Clinvar the most comprehensive and reliable source of disease-causing genes and variants?
clinvar disease-causing genetic-disease omim
6.3 years ago by Biomed 5.0k
2
votes
1
reply
1.5k
views
Expired Illumina GSA chips
SNP chip GSA
6.4 years ago by Biomed 5.0k
119
votes
25
replies
125k
views
12 follow
Where Can I Download Human Reference Genome In Fasta Format? Hgref.Fa File
human fasta sequence bwa
updated 7.8 years ago by ▴ 170 • written 14.4 years ago by 5.0k
12
votes
5
replies
3.0k
views
What Is A Good Computer Science Journal For The Non-Computer Scientist?
updated 8.0 years ago by 20 • written 13.9 years ago by 5.0k
3
votes
5
replies
2.3k
views
What are the resources to design the most comprehensive clinical SNP chip?
SNP clinical primary care
8.4 years ago by Biomed 5.0k
17
votes
9
replies
14k
views
How Can I Get These Information About Bam Files?
bam next-gen sequencing
updated 8.5 years ago by 20 • written 14.0 years ago by 5.0k
0
votes
0
replies
2.3k
views
Comment: C: What are the resources to design the most comprehensive clinical SNP chip?
8.5 years ago by Biomed 5.0k
0
votes
1
reply
2.3k
views
Comment: C: How can design the most comprehensive "clinical" SNP chip?
8.5 years ago by Biomed 5.0k
13
votes
7
replies
5.6k
views
Export2Fastq Conversion
fastq illumina next-gen sequencing
updated 8.7 years ago by • 0 • written 14.4 years ago by 5.0k
53
votes
16
replies
36k
views
14 follow
Dbsnp : Best Way To Obtain Data On Snps
dbsnp
updated 2.8 years ago by ▴ 10 • written 14.5 years ago by 5.0k
3
votes
5
replies
4.6k
views
Pysam Snp Calling
updated 9.8 years ago by 20 • written 13.5 years ago by 5.0k
237
votes
45
replies
74k
views
34 follow
What Is The Best Pipeline For Human Whole Exome Sequencing?
next-gen sequencing illumina exome human
updated 13.5 years ago by ▴ 50 • written 14.5 years ago by 5.0k
8
votes
6
replies
5.1k
views
Haplotype Determination With Next-Gen Data In Nuclear Families
haplotype next-gen sequencing
updated 2.9 years ago by 44k • written 14.0 years ago by 5.0k
23
votes
12
replies
7.7k
views
7 follow
Dbsnp132 1000Genomes Vcf File Info Field: Bitfield Structure
dbsnp vcf genome
updated 10.3 years ago by ★ 4.0k • written 14.0 years ago by 5.0k
20
votes
8
replies
6.2k
views
Baseline Configuration Of A Bioinformatics Server
server
updated 10.7 years ago by 20 • written 14.6 years ago by 5.0k
11
votes
5
replies
3.8k
views
Jumping To The Next Bed Coordinate In The Ucsc Genome Browser
ucsc
updated 10.8 years ago by 20 • written 13.4 years ago by 5.0k
50
votes
8
replies
15k
views
9 follow
Expression Databases For Human Genes
gene
updated 11.5 years ago by ▴ 190 • written 14.0 years ago by 5.0k
39
votes
13
replies
31k
views
10 follow
Human Exome Capture Library Coordinates Download
exome agilent next-gen sequencing
updated 11.5 years ago by ★ 1.2k • written 13.8 years ago by 5.0k
0
votes
0
replies
4.4k
views
Comment: C: Conservation At Amino Acid Level
12.4 years ago by Biomed 5.0k
0
votes
1
reply
4.4k
views
Comment: C: Conservation At Amino Acid Level
12.4 years ago by Biomed 5.0k
3
votes
6
replies
4.4k
views
Conservation At Amino Acid Level
conservation annotation
updated 12.4 years ago by 4.2k • written 12.4 years ago by 5.0k
2
votes
1
reply
3.0k
views
Functional Validation Of A 5' Utr Mutation
utr
updated 12.4 years ago by 13k • written 12.4 years ago by 5.0k
0
votes
0
replies
6.4k
views
Comment: C: I Need To Plot 73 Mutations On A Large Gene With >60 Exons
12.5 years ago by Biomed 5.0k
15
votes
6
replies
6.4k
views
I Need To Plot 73 Mutations On A Large Gene With >60 Exons
mutation gene plot
updated 12.5 years ago by 20k • written 12.5 years ago by 5.0k
0
votes
0
replies
5.5k
views
Comment: C: Which Mappability Track To Use?
12.8 years ago by Biomed 5.0k
0
votes
0
replies
65k
views
Comment: C: What Is The Difference Between Hg18 And Hg19?
12.8 years ago by Biomed 5.0k
0
votes
0
replies
5.5k
views
Comment: C: Which Mappability Track To Use?
12.8 years ago by Biomed 5.0k
8
votes
7
replies
5.5k
views
Which Mappability Track To Use?
ucsc
updated 12.8 years ago by 4.8k • written 12.8 years ago by 5.0k
0
votes
0
replies
65k
views
Comment: C: What Is The Difference Between Hg18 And Hg19?
12.8 years ago by Biomed 5.0k
7
votes
6
replies
65k
views
Answer: A: What Is The Difference Between Hg18 And Hg19?
12.8 years ago by Biomed 5.0k
5
votes
1
reply
2.8k
views
Why Do We Align Each Pair Set Separately In An Illumina Paired End Sequencing Study?
next-gen sequencing
updated 12.8 years ago by ★ 1.6k • written 12.8 years ago by 5.0k
0
votes
0
replies
4.2k
views
Comment: C: Bwa Aln For Snp/Indel Discovery With Paired End 100Bp Human Dna Reads
12.8 years ago by Biomed 5.0k
0
votes
0
replies
9.4k
views
Comment: C: Illlumina Paired End Reads File Format
12.8 years ago by Biomed 5.0k
6
votes
8
replies
7.2k
views
What Is The Best Program To Determine Structural Variation (Cnv) For Illumina Omniexpress Data?
cnv illumina structural sv
updated 12.9 years ago by • 0 • written 14.0 years ago by 5.0k
23
votes
12
replies
7.5k
views
6 follow
Reasons Why A Region In The Human Genome May Get Bad Sequence/Alignment Using Illumina Platform?
illumina next-gen sequencing
updated 13.0 years ago by 16k • written 13.0 years ago by 5.0k
0
votes
0
replies
7.5k
views
Comment: C: Reasons Why A Region In The Human Genome May Get Bad Sequence/Alignment Using Il
13.0 years ago by Biomed 5.0k
0
votes
0
replies
7.5k
views
Comment: C: Reasons Why A Region In The Human Genome May Get Bad Sequence/Alignment Using Il
13.0 years ago by Biomed 5.0k
1
vote
1
reply
23k
views
Answer: A: Converting Illumina Raw Genotype Data Into Plink Ped Format
13.1 years ago by Biomed 5.0k
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