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2
votes
1
reply
5.0k
views
Comment: C: Error when trying to run IGV on server
5.2 years ago by steve ★ 3.5k
0
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0
replies
3.9k
views
Comment: C: Trimmomatic did a massive trimming!!!
5.2 years ago by steve ★ 3.5k
0
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0
replies
3.9k
views
Comment: C: Gene Annotation in Bed file
5.2 years ago by steve ★ 3.5k
0
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1
reply
1.8k
views
Comment: C: Exploring H3K27me3 loss in cancer
5.2 years ago by steve ★ 3.5k
0
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0
replies
3.1k
views
Comment: C: bcftools call error "--gvcf output mode requires FORMAT/DP tag, which is not pre
5.2 years ago by steve ★ 3.5k
0
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0
replies
5.0k
views
Comment: C: Python and SLURM environment : clarifications needed
5.2 years ago by steve ★ 3.5k
0
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0
replies
5.0k
views
Comment: C: Python and SLURM environment : clarifications needed
5.2 years ago by steve ★ 3.5k
0
votes
0
replies
3.7k
views
Comment: C: How to filter GTF file and only print lines where the tag is a certain value?
5.2 years ago by steve ★ 3.5k
3
votes
1
reply
5.0k
views
Answer: A: Python and SLURM environment : clarifications needed
5.2 years ago by steve ★ 3.5k
0
votes
1
reply
4.0k
views
Comment: C: Problem: GATK insallation
5.2 years ago by steve ★ 3.5k
1
vote
1
reply
9.1k
views
Comment: C: How to Demultiplex a fastq.gz file.
5.3 years ago by steve ★ 3.5k
0
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0
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2.0k
views
Answer: A: Add tag to FORMAT tab of vcf
5.3 years ago by steve ★ 3.5k
0
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0
replies
2.0k
views
Comment: C: Add tag to FORMAT tab of vcf
5.3 years ago by steve ★ 3.5k
1
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0
replies
9.1k
views
Answer: C: How to Demultiplex a fastq.gz file.
5.3 years ago by steve ★ 3.5k
1
vote
0
replies
2.2k
views
Answer: A: How to subset fastq data based on leading nt of sequences?
5.3 years ago by steve ★ 3.5k
0
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0
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2.2k
views
Comment: C: How to subset fastq data based on leading nt of sequences?
5.3 years ago by steve ★ 3.5k
0
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0
replies
1.5k
views
Answer: A: varscan2 reports wrong DP related values
5.3 years ago by steve ★ 3.5k
1
vote
0
replies
1.5k
views
Comment: C: Career related query
5.3 years ago by steve ★ 3.5k
0
votes
0
replies
1.5k
views
Comment: C: Career related query
5.3 years ago by steve ★ 3.5k
3
votes
0
replies
46k
views
Comment: C: Snakemake vs. Nextflow: strengths and weaknesses
5.3 years ago by steve ★ 3.5k
0
votes
0
replies
13k
views
Comment: C: How to tell which transcript is the canonical transcript?
5.3 years ago by steve ★ 3.5k
0
votes
1
reply
13k
views
Comment: C: How to tell which transcript is the canonical transcript?
5.3 years ago by steve ★ 3.5k
0
votes
1
reply
948
views
Comment: C: Introducing Crossmapper pipeline
5.3 years ago by steve ★ 3.5k
15
votes
7
replies
6.9k
views
Tutorial: Visualization of ChIP-Seq peak overlaps using HOMER mergePeaks and UpSetR
ChIP-Seq peaks R HOMER
updated 20 months ago by 44k • written 8.5 years ago by ★ 3.5k
0
votes
0
replies
2.6k
views
Comment: C: issue in the vcf format using Mutect2
5.3 years ago by steve ★ 3.5k
0
votes
0
replies
3.5k
views
Comment: C: CNVKIT - unable to produce scatter and diagram pdfs
5.3 years ago by steve ★ 3.5k
1
vote
1
reply
3.5k
views
Comment: C: CNVKIT - unable to produce scatter and diagram pdfs
5.3 years ago by steve ★ 3.5k
0
votes
1
reply
3.5k
views
Comment: C: CNVKIT - unable to produce scatter and diagram pdfs
5.3 years ago by steve ★ 3.5k
0
votes
0
replies
2.2k
views
Comment: C: Plotting Allele Frequencies
5.3 years ago by steve ★ 3.5k
1
vote
0
replies
2.2k
views
Comment: C: Plotting Allele Frequencies
5.3 years ago by steve ★ 3.5k
1
vote
1
reply
3.5k
views
Comment: C: CNVKIT - unable to produce scatter and diagram pdfs
5.3 years ago by steve ★ 3.5k
0
votes
1
reply
2.7k
views
Comment: C: Fastqc works in terminal fastqc not found during jupyter call
5.3 years ago by steve ★ 3.5k
1
vote
1
reply
1.3k
views
Comment: C: Issue with Cluster
5.3 years ago by steve ★ 3.5k
0
votes
0
replies
1.0k
views
Comment: C: what are the best tools/softwares to perform diagnostic analysis of a somatic ca
5.3 years ago by steve ★ 3.5k
1
vote
0
replies
1.1k
views
Comment: C: Tool for identifying INDELs and Tandem duplication break points
5.3 years ago by steve ★ 3.5k
0
votes
0
replies
3.5k
views
Comment: C: How to draw a chromosome graph with only selected genes marked in it
5.4 years ago by steve ★ 3.5k
0
votes
0
replies
2.6k
views
Comment: C: Using DRMAA in bioinformatics workflows?
5.4 years ago by steve ★ 3.5k
0
votes
0
replies
11k
views
Comment: C: Samtools problem with running (Conda)
5.4 years ago by steve ★ 3.5k
1
vote
1
reply
11k
views
Comment: C: Samtools problem with running (Conda)
5.4 years ago by steve ★ 3.5k
6
votes
2
replies
11k
views
Answer: A: Samtools problem with running (Conda)
5.4 years ago by steve ★ 3.5k
0
votes
0
replies
1.9k
views
Comment: C: Experience running Nextflow based pipelines on an on-premise Kubernetes cluster,
5.4 years ago by steve ★ 3.5k
1
vote
1
reply
1.9k
views
Comment: C: Experience running Nextflow based pipelines on an on-premise Kubernetes cluster,
5.4 years ago by steve ★ 3.5k
1
vote
0
replies
2.3k
views
Comment: C: Export Coverage on IGV
5.4 years ago by steve ★ 3.5k
0
votes
1
reply
994
views
Safe ways to chunk data to speed up Pindel?
pindel indel
5.4 years ago by steve ★ 3.5k
0
votes
0
replies
985
views
Comment: C: Best practice for serial variant calling
5.4 years ago by steve ★ 3.5k
0
votes
2
replies
985
views
Comment: C: Best practice for serial variant calling
5.4 years ago by steve ★ 3.5k
1
vote
0
replies
4.4k
views
Comment: C: Somatic indel calling with Pindel
5.4 years ago by steve ★ 3.5k
15
votes
7
replies
11k
views
Is hierarchical clustering of significant genes 'supervised' or 'unsupervised' clustering?
RNA-Seq heatmap clustering
updated 5.5 years ago by ▴ 330 • written 8.0 years ago by ★ 3.5k
0
votes
1
reply
3.8k
views
Comment: C: Portable genome browser
5.5 years ago by steve ★ 3.5k
1
vote
0
replies
1.4k
views
Comment: C: Is there a Pyinstaller hook for Biopython imports? How to package a Biopython sc
5.5 years ago by steve ★ 3.5k
370 results • Page 3 of 8
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