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5
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3
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4.3k
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Answer: Answer: DESeq2 design for two variables and pairwise comparisons
3.6 years ago by Carlo Yague 8.9k
0
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0
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11k
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Comment: Comment: ANOVA for RNA-seq data?
3.6 years ago by Carlo Yague 8.9k
0
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2
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11k
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Comment: Comment: ANOVA for RNA-seq data?
3.6 years ago by Carlo Yague 8.9k
0
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0
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885
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Comment: Comment: Coverage required for 3' end RNA-seq methods
3.6 years ago by Carlo Yague 8.9k
0
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0
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1.4k
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Comment: Comment: I tried to compare results which I got it from DESeq2, but got this error?
3.6 years ago by Carlo Yague 8.9k
0
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2
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1.4k
views
Comment: Comment: I tried to compare results which I got it from DESeq2, but got this error?
3.6 years ago by Carlo Yague 8.9k
1
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0
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1.1k
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Comment: Comment: Assigning small RNA reads
3.6 years ago by Carlo Yague 8.9k
0
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1
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1.1k
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Comment: Comment: Assigning small RNA reads
3.6 years ago by Carlo Yague 8.9k
1
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0
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1.5k
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Comment: Comment: Joining blast hits together into single fasta sequence
3.6 years ago by Carlo Yague 8.9k
1
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1
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1.5k
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Comment: Comment: Joining blast hits together into single fasta sequence
3.6 years ago by Carlo Yague 8.9k
3
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0
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759
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Answer: Answer: Is it bad practice to change threshold for interaction probability?
3.6 years ago by Carlo Yague 8.9k
1
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1
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1.5k
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Comment: Comment: Convert per base bedgraph to Bed format
3.6 years ago by Carlo Yague 8.9k
0
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0
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777
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Comment: Comment: How to generate bam files containing the entire read alignments?
3.7 years ago by Carlo Yague 8.9k
0
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0
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1.1k
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Comment: Comment: Comparing Log2 Fold Change Values across all timepoints between two groups in DE
3.7 years ago by Carlo Yague 8.9k
1
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0
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2.2k
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Comment: Comment: Quantification of stranded RNA-seq data
3.7 years ago by Carlo Yague 8.9k
0
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1
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2.2k
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Answer: Answer: Quantification of stranded RNA-seq data
3.7 years ago by Carlo Yague 8.9k
1
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1
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2.4k
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Comment: Comment: What are the necessary and sufficient conditions for applying a multiple hypothe
3.7 years ago by Carlo Yague 8.9k
1
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0
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2.4k
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Comment: Comment: What are the necessary and sufficient conditions for applying a multiple hypothe
3.7 years ago by Carlo Yague 8.9k
0
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0
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891
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Comment: C: featurecounts -p Paried ends which count total to use as read1 &read 2 give diff
3.7 years ago by Carlo Yague 8.9k
2
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1
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891
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Comment: C: featurecounts -p Paried ends which count total to use as read1 &read 2 give diff
3.7 years ago by Carlo Yague 8.9k
0
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0
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2.2k
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Comment: C: What Are The Best Bioinformatics Course Materials [2020]
3.7 years ago by Carlo Yague 8.9k
0
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1
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4.8k
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Comment: C: Chip-Seq Data Analysis
3.7 years ago by Carlo Yague 8.9k
0
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1
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3.4k
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Comment: C: Merge bigwig Files with different intervals
3.7 years ago by Carlo Yague 8.9k
0
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1
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3.4k
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Comment: C: Merge bigwig Files with different intervals
3.7 years ago by Carlo Yague 8.9k
0
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0
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3.4k
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Comment: C: Merge bigwig Files with different intervals
3.7 years ago by Carlo Yague 8.9k
0
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1
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3.4k
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Comment: C: Merge bigwig Files with different intervals
3.8 years ago by Carlo Yague 8.9k
1
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0
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594
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Answer: A: Batch-correction of partially confounded RNA-seq data
3.8 years ago by Carlo Yague 8.9k
1
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1
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4.0k
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Comment: C: How to sort fasta file numerically
3.8 years ago by Carlo Yague 8.9k
1
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1
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7.5k
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Answer: A: scatter plot, aov()
3.8 years ago by Carlo Yague 8.9k
0
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0
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1.4k
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Comment: C: Blastn max target sequences
3.8 years ago by Carlo Yague 8.9k
0
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1
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1.5k
views
Comment: C: ground truth dataset for BAM read counts
3.8 years ago by Carlo Yague 8.9k
0
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2
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7.2k
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Answer: C: Samtools command not found
3.8 years ago by Carlo Yague 8.9k
1
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1
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2.9k
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Comment: C: TMM normalized TPM
3.8 years ago by Carlo Yague 8.9k
0
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0
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2.9k
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Comment: C: Gene length corrected TMM normalized data
3.8 years ago by Carlo Yague 8.9k
0
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1
reply
1.5k
views
Comment: C: ground truth dataset for BAM read counts
3.8 years ago by Carlo Yague 8.9k
0
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1
reply
1.5k
views
Comment: C: ground truth dataset for BAM read counts
3.8 years ago by Carlo Yague 8.9k
1
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1
reply
1.2k
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Comment: C: DESeq multiple factor question
3.8 years ago by Carlo Yague 8.9k
1
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1
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1.2k
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Comment: C: DESeq multiple factor question
3.8 years ago by Carlo Yague 8.9k
1
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1
reply
1.2k
views
Answer: A: DESeq multiple factor question
3.8 years ago by Carlo Yague 8.9k
0
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0
replies
998
views
Comment: C: Heatmap of top 20 genes
3.8 years ago by Carlo Yague 8.9k
0
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1
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998
views
Comment: C: Heatmap of top 20 genes
3.8 years ago by Carlo Yague 8.9k
2
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0
replies
1.1k
views
Answer: A: Is it necessary to test for multiple correction during differential expression a
3.8 years ago by Carlo Yague 8.9k
3
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1
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1.2k
views
Answer: A: Merging chip-seq samples sequenced in two different runs
3.8 years ago by Carlo Yague 8.9k
0
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0
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702
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Comment: C: extract split-read from bam/cram file
3.8 years ago by Carlo Yague 8.9k
0
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1
reply
698
views
Comment: C: Including 2 factors vs 1 factor in Design Formula for DESeq2
3.8 years ago by Carlo Yague 8.9k
1
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0
replies
2.9k
views
Answer: A: featureCounts paired end mode
3.8 years ago by Carlo Yague 8.9k
0
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0
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651
views
Comment: C: PCA analysis using DESEq2 pipeline
3.8 years ago by Carlo Yague 8.9k
0
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0
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715
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Answer: A: Regarding tophat output
3.8 years ago by Carlo Yague 8.9k
4
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1
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1.5k
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Answer: A: Read counts generated from featureCounts
3.8 years ago by Carlo Yague 8.9k
0
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1
reply
1.5k
views
Comment: C: Read counts generated from featureCounts
3.8 years ago by Carlo Yague 8.9k
995 results • Page 6 of 20
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