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Comment: C: Read counts generated from featureCounts
3.8 years ago by Carlo Yague 8.9k
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Comment: C: RNA-seq power estimation using ssizeRNA program
3.8 years ago by Carlo Yague 8.9k
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Answer: A: bowtie2 --un vs --un-conc
3.8 years ago by Carlo Yague 8.9k
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Comment: C: Outputting Unassigned reads from Rsubread featureCounts
3.8 years ago by Carlo Yague 8.9k
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Comment: C: Riboseq - pairs unaligned to rRNA get mixed up
3.8 years ago by Carlo Yague 8.9k
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1.9k
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Comment: C: Riboseq - pairs unaligned to rRNA get mixed up
3.8 years ago by Carlo Yague 8.9k
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Answer: C: Adapters remains after cutting them out
3.8 years ago by Carlo Yague 8.9k
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Comment: C: Adapters remains after cutting them out
3.8 years ago by Carlo Yague 8.9k
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1.9k
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Comment: C: Riboseq - pairs unaligned to rRNA get mixed up
3.8 years ago by Carlo Yague 8.9k
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1
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1.9k
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Comment: C: Riboseq - pairs unaligned to rRNA get mixed up
3.8 years ago by Carlo Yague 8.9k
1
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2.9k
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Answer: A: Outputting Unassigned reads from Rsubread featureCounts
3.8 years ago by Carlo Yague 8.9k
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2.2k
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Comment: C: Wig to Bigwig - UCSC software - error in "item ends"
3.9 years ago by Carlo Yague 8.9k
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Comment: C: Wig to Bigwig - UCSC software - error in "item ends"
3.9 years ago by Carlo Yague 8.9k
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1.1k
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Answer: A: RNAseq data for Deseq2 from different library
3.9 years ago by Carlo Yague 8.9k
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2.2k
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Comment: C: Using Deseq2 for RNA-seq analysis of 4 different groups of cells
3.9 years ago by Carlo Yague 8.9k
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2.2k
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Answer: A: Using Deseq2 for RNA-seq analysis of 4 different groups of cells
3.9 years ago by Carlo Yague 8.9k
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1.9k
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Comment: C: Extract the overlapping paired-end reads
3.9 years ago by Carlo Yague 8.9k
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1.2k
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Comment: C: Problem with design for DESeq2
3.9 years ago by Carlo Yague 8.9k
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770
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Answer: A: How correlate between transcriptome data and expression, without proteome data?
3.9 years ago by Carlo Yague 8.9k
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Comment: C: During RNA-seq analysis a lot of pseudogenes come up as DE
3.9 years ago by Carlo Yague 8.9k
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Comment: C: champ.norm task 1 failed - "could not find function "blc""
3.9 years ago by Carlo Yague 8.9k
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2.4k
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Comment: C: champ.norm task 1 failed - "could not find function "blc""
3.9 years ago by Carlo Yague 8.9k
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2.4k
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Answer: C: champ.norm task 1 failed - "could not find function "blc""
3.9 years ago by Carlo Yague 8.9k
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2.4k
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Comment: C: champ.norm task 1 failed - "could not find function "blc""
3.9 years ago by Carlo Yague 8.9k
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1
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2.4k
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Comment: C: champ.norm task 1 failed - "could not find function "blc""
3.9 years ago by Carlo Yague 8.9k
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1.2k
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Comment: C: editing gtf file
3.9 years ago by Carlo Yague 8.9k
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2.0k
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Comment: C: Despite being in 2021
3.9 years ago by Carlo Yague 8.9k
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1.0k
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Comment: C: Will quantile normalization affect the result of the Tau statistic?
3.9 years ago by Carlo Yague 8.9k
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2.4k
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Comment: C: Very generally speaking, what are valid criteria to decide that a sample is an o
3.9 years ago by Carlo Yague 8.9k
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2.4k
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Comment: C: Very generally speaking, what are valid criteria to decide that a sample is an o
3.9 years ago by Carlo Yague 8.9k
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1.5k
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Comment: C: Cannot find appropriate manuscript type in Briefings In Bioinformatics submissio
3.9 years ago by Carlo Yague 8.9k
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5.0k
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Comment: C: Split paired-end reads BAM file into Forward and Reverse Strands
3.9 years ago by Carlo Yague 8.9k
25
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6 follow
Forum: What Are The Best Bioinformatics Course Materials [2020]
course teaching
updated 18 months ago by 44k • written 3.9 years ago by 8.9k
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Comment: C: Split paired-end reads BAM file into Forward and Reverse Strands
4.0 years ago by Carlo Yague 8.9k
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1.6k
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Comment: C: How to extract DEGs from ".genes.fpkm_tracking" and ".isoforms.fpkm_tracking" fi
4.0 years ago by Carlo Yague 8.9k
0
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1
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3.5k
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Comment: C: Specify coefficient results group on dds in DESEq2
4.0 years ago by Carlo Yague 8.9k
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1.0k
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Comment: C: Merging same one column different files
4.0 years ago by Carlo Yague 8.9k
2
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1.0k
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Answer: A: Mergine same one column different files
4.0 years ago by Carlo Yague 8.9k
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17k
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Comment: C: Which Trimmomatic adapter file cuts the "Illumina Universal Adapter"?
4.0 years ago by Carlo Yague 8.9k
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1
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17k
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Comment: C: Which Trimmomatic adapter file cuts the "Illumina Universal Adapter"?
4.0 years ago by Carlo Yague 8.9k
0
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1
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17k
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Comment: C: Which Trimmomatic adapter file cuts the "Illumina Universal Adapter"?
4.0 years ago by Carlo Yague 8.9k
0
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1
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17k
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Answer: A: Which Trimmomatic adapter file cuts the "Illumina Universal Adapter"?
4.0 years ago by Carlo Yague 8.9k
0
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1
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778
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Comment: C: BLAST standalone: length and missmatches
4.0 years ago by Carlo Yague 8.9k
4
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1.1k
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Answer: A: Why removing sample from one group in DESeqDataSet changes DGE of other two grou
4.0 years ago by Carlo Yague 8.9k
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2.5k
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Comment: C: How to plot ROC curve using qRT-PCR data?
4.0 years ago by Carlo Yague 8.9k
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5.2k
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Answer: A: Best open source genome browser in 2020
4.0 years ago by Carlo Yague 8.9k
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959
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Comment: C: annotation of chipseq peaks
4.0 years ago by Carlo Yague 8.9k
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2.0k
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Comment: C: How does DEseq calculate p value when n=1?
4.0 years ago by Carlo Yague 8.9k
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791
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Answer: A: featureCounts: strandedness problem/inconsistency
4.0 years ago by Carlo Yague 8.9k
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1.3k
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Comment: C: How to count the number of alignments in a bam file without using samtools?
4.0 years ago by Carlo Yague 8.9k
995 results • Page 7 of 20
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