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Comment: C: How to find On-Target and Off-Targer percentage of reads?
7.8 years ago by bioinforesearchquestions ▴ 370
5
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9
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15k
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How to find On-Target and Off-Targer percentage of reads?
DNAseq Exome targeted sequencing bam
updated 7.8 years ago by ▴ 310 • written 7.8 years ago by ▴ 370
3
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5
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1.6k
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Are there any tools which display SNPs inside each gene?
gene graphical DNAseq SNP
updated 7.9 years ago by ★ 3.6k • written 7.9 years ago by ▴ 370
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1.6k
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Comment: C: Are there any tools which display SNPs inside each gene?
7.9 years ago by bioinforesearchquestions ▴ 370
0
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1
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1.6k
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Comment: C: Are there any tools which display SNPs inside each gene?
7.9 years ago by bioinforesearchquestions ▴ 370
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0
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2.8k
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Comment: C: Comparing splicing events and splicing junctions for cancer n normal samples fro
7.9 years ago by bioinforesearchquestions ▴ 370
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0
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5.6k
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Comment: C: How to annotate CNV events with gene information?
8.1 years ago by bioinforesearchquestions ▴ 370
0
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1
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2.8k
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Comment: C: Comparing splicing events and splicing junctions for cancer n normal samples fro
8.1 years ago by bioinforesearchquestions ▴ 370
5
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4
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5.6k
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How to annotate CNV events with gene information?
SNP RNA DNA-seq CNV events annovar
updated 8.1 years ago by ★ 2.3k • written 8.1 years ago by ▴ 370
4
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8
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2.2k
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Need suggestions on increasing the computational power for the bioinformatics analyses involving DNAseq, RNAseq, Chipseq pipeline
RNA-Seq SNP DNA-Seq next-gen
updated 8.1 years ago by ▴ 250 • written 8.1 years ago by ▴ 370
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1
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2.2k
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Comment: C: Need suggestions on increasing the computational power for the bioinformatics an
8.1 years ago by bioinforesearchquestions ▴ 370
0
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1
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2.2k
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Comment: C: Need suggestions on increasing the computational power for the bioinformatics an
8.1 years ago by bioinforesearchquestions ▴ 370
0
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0
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2.2k
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Comment: C: Need suggestions on increasing the computational power for the bioinformatics an
8.1 years ago by bioinforesearchquestions ▴ 370
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0
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3.9k
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Comment: C: How To Get Chromosome Position Given Rs Number?
8.1 years ago by bioinforesearchquestions ▴ 370
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1
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2.8k
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Comment: C: Comparing splicing events and splicing junctions for cancer n normal samples fro
8.1 years ago by bioinforesearchquestions ▴ 370
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0
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2.0k
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Comment: C: Is it possible to change a username?
8.1 years ago by bioinforesearchquestions ▴ 370
0
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1
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2.0k
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Comment: C: Is it possible to change a username?
8.1 years ago by bioinforesearchquestions ▴ 370
0
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1
reply
2.0k
views
Comment: C: Is it possible to change a username?
8.1 years ago by bioinforesearchquestions ▴ 370
1
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6
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2.8k
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Comparing splicing events and splicing junctions for cancer n normal samples from RNA-seq data
RNA-Seq rna-seq sequencing splicing
8.1 years ago by bioinforesearchquestions ▴ 370
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0
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4.0k
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Comment: C: How to download the low mappability regions from the UCSC browser
8.2 years ago by bioinforesearchquestions ▴ 370
1
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2
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4.0k
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How to download the low mappability regions from the UCSC browser
DNA-seq RNA-seq CNV SNP
8.2 years ago by bioinforesearchquestions ▴ 370
2
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4
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1.6k
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For RNAseq, is it mandatory to have approximately the same number of reads between the normal and cancer samples?
RNA-Seq
updated 8.2 years ago by ▴ 750 • written 8.3 years ago by ▴ 370
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0
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3.7k
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Comment: C: Comparing the output from DESeq and DESeq2
8.2 years ago by bioinforesearchquestions ▴ 370
3
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2
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3.7k
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Comparing the output from DESeq and DESeq2
RNA-Seq
updated 8.2 years ago by 13k • written 8.2 years ago by ▴ 370
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0
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3.2k
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Comment: C: Differential gene expression based on read counts using DESeq package
8.2 years ago by bioinforesearchquestions ▴ 370
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0
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3.2k
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Comment: C: Differential gene expression based on read counts using DESeq package
8.2 years ago by bioinforesearchquestions ▴ 370
0
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0
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3.2k
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Comment: C: Differential gene expression based on read counts using DESeq package
8.2 years ago by bioinforesearchquestions ▴ 370
0
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0
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3.2k
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Comment: C: Differential gene expression based on read counts using DESeq package
8.2 years ago by bioinforesearchquestions ▴ 370
3
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7
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3.2k
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Differential gene expression based on read counts using DESeq package
RNA-Seq
updated 8.2 years ago by ★ 1.8k • written 8.2 years ago by ▴ 370
0
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1
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2.0k
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Comment: C: Is my pair (1 cancer and 1 normal) considered as biological replicates?
8.2 years ago by bioinforesearchquestions ▴ 370
2
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3
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2.0k
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Is my pair (1 cancer and 1 normal) considered as biological replicates?
RNA-Seq
updated 8.2 years ago by 13k • written 8.2 years ago by ▴ 370
0
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1
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1.6k
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Comment: C: For RNAseq, is it mandatory to have approximately the same number of reads betwe
8.2 years ago by bioinforesearchquestions ▴ 370
0
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0
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1.8k
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Comment: C: Find DEG between sample with replicates and sample without replicates
8.3 years ago by bioinforesearchquestions ▴ 370
1
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2
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2.3k
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Queries regarding cuffdiff output especially gene_exp_diff (Tumor and Normal) no replicates
RNA-Seq rna-seq
8.3 years ago by bioinforesearchquestions ▴ 370
0
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0
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5.7k
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Comment: C: How to determine Up and Down regulated genes from log2(fold change)of the Cuffdi
8.3 years ago by bioinforesearchquestions ▴ 370
0
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0
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6.1k
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Comment: C: Cuffdiff De Significance Of Zero Fpkm Values
8.3 years ago by bioinforesearchquestions ▴ 370
0
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0
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2.3k
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Comment: C: Queries regarding cuffdiff output especially gene_exp_diff
8.3 years ago by bioinforesearchquestions ▴ 370
1
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0
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8.7k
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Comment: C: DE analysis by edgeR
8.3 years ago by bioinforesearchquestions ▴ 370
0
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0
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3.4k
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Comment: C: What is the significance threshold for differential gene expression (10folds, 50
8.3 years ago by bioinforesearchquestions ▴ 370
0
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0
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4.1k
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Comment: C: I am trying to load a BAM file (Whole Genome) to IGV but I can't see anything
8.3 years ago by bioinforesearchquestions ▴ 370
0
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1
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3.4k
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Comment: C: What is the significance threshold for differential gene expression (10folds, 50
8.3 years ago by bioinforesearchquestions ▴ 370
2
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5
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3.4k
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What is the significance threshold for differential gene expression (10folds, 50folds, 100folds) between tumor and normal sample?
RNA-Seq
updated 8.3 years ago by 47k • written 8.3 years ago by ▴ 370
0
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1
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4.4k
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Comment: C: Calculating number of reads in a specific region from sam file
8.3 years ago by bioinforesearchquestions ▴ 370
0
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1
reply
2.7k
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Comment: C: Interpreting Allele frequency equal to 1.0
8.3 years ago by bioinforesearchquestions ▴ 370
0
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0
replies
1.7k
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What is the threshold vaue for mapping quality
snps indels DNASeq RNASeq
8.3 years ago by bioinforesearchquestions ▴ 370
0
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1
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5.6k
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Comment: C: Genotype representation for male chromosome X and Y
8.3 years ago by bioinforesearchquestions ▴ 370
2
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8
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5.6k
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Genotype representation for male chromosome X and Y
snps dnaseq vcf genotype
8.3 years ago by bioinforesearchquestions ▴ 370
0
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1
reply
3.2k
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Comment: C: Filtering multisample VCF based on genotype using SnpSift filter
8.4 years ago by bioinforesearchquestions ▴ 370
0
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0
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2.7k
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Comment: C: SnpSift filtering with missense variant error command
8.4 years ago by bioinforesearchquestions ▴ 370
0
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3
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3.2k
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Filtering multisample VCF based on genotype using SnpSift filter
VCF snpSift genotype DNASeq snps
updated 8.4 years ago by 44k • written 8.4 years ago by ▴ 370
285 results • Page 5 of 6
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