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0
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7.4k
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Comment: C: extract only rows eith numbers?
6.3 years ago by star ▴ 350
5
votes
3
replies
2.1k
views
How to extract aligned exactly 1 time in Single end read?
alignment bowtie2 bwa
updated 6.4 years ago by 12k • written 6.4 years ago by ▴ 350
0
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1
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2.1k
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Comment: C: How extract aligned exactly 1 time in Single end read?
6.4 years ago by star ▴ 350
0
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0
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1.9k
views
Comment: C: no exact read?
6.4 years ago by star ▴ 350
0
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0
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1.9k
views
Comment: C: no exact read?
6.4 years ago by star ▴ 350
4
votes
4
replies
1.9k
views
no exact read?
R ChIP-Seq alignment bowtie2 bwa
6.4 years ago by star ▴ 350
8
votes
4
replies
5.9k
views
Peak calling using macs2?
macs2 ChIP-Seq Peak-calling peaks
updated 6.5 years ago by 44k • written 6.5 years ago by ▴ 350
7
votes
3
replies
3.9k
views
how to consider batch effect in design matrix?
R edgeR design matrix differential expression
6.6 years ago by star ▴ 350
0
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1
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3.9k
views
Comment: C: how to consider batch effect in design matrix?
6.6 years ago by star ▴ 350
4
votes
3
replies
1.2k
views
find significant analysis?
R statistic fisher.test
updated 6.6 years ago by • 0 • written 6.6 years ago by ▴ 350
1
vote
1
reply
1.6k
views
Design matrix for edge R analysis?
r edgeR bioconductor limma statistics
6.6 years ago by star ▴ 350
0
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0
replies
2.1k
views
Comment: C: Compare SE sequence with PE sequnce?
6.6 years ago by star ▴ 350
0
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0
replies
2.1k
views
Comment: C: Compare SE sequence with PE sequnce?
6.6 years ago by star ▴ 350
0
votes
6
replies
2.1k
views
Compare SE sequence with PE sequnce?
RNA-Seq R
6.6 years ago by star ▴ 350
2
votes
1
reply
3.2k
views
full rank designe matrix?
R edgeR bioconductor
updated 6.7 years ago by 147k • written 6.7 years ago by ▴ 350
2
votes
2
replies
939
views
I would like to compare my RNA seq file together to find overlap?
RNA-Seq genome sequencing bam fastq
6.7 years ago by star ▴ 350
0
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0
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5.9k
views
Comment: C: Merging RNA-seq sample with several replicate in which step?
6.7 years ago by star ▴ 350
0
votes
0
replies
5.9k
views
Comment: C: Merging RNA-seq sample with several replicate in which step?
6.7 years ago by star ▴ 350
4
votes
7
replies
5.9k
views
Merging RNA-seq sample with several replicate in which step?
RNA-Seq R genome alignment
updated 6.7 years ago by 14k • written 6.7 years ago by ▴ 350
0
votes
1
reply
5.9k
views
Comment: C: Merging RNA-seq sample with several replicate in which step?
6.7 years ago by star ▴ 350
0
votes
3
replies
2.3k
views
Biomart error: Does anyone know how to solve this error?
R biomart ensembl genome
updated 6.8 years ago by ★ 5.2k • written 6.8 years ago by ▴ 350
0
votes
1
reply
2.2k
views
How can link up ENSG identifiers with Uniprot identifiers by biopython libraries?
python biopython
7.9 years ago by star ▴ 350
3
votes
2
replies
2.0k
views
How should I define contrast with more than 2 levels in DESeq2 ?
RNA-Seq DESeq
updated 19 months ago by 44k • written 8.0 years ago by ▴ 350
1
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1
reply
1.4k
views
Is it possible to calculate the average of dispersion in DESeq2 R package and draw different type of plot for it?
R DESeq2 EdgeR
updated 8.1 years ago by 104k • written 8.1 years ago by ▴ 350
4
votes
2
replies
2.2k
views
number of grouping affect log2 fold change in DESeq2 analysis?
R DESeq2 edgeR log2FC
updated 8.2 years ago by 104k • written 8.2 years ago by ▴ 350
0
votes
1
reply
1.6k
views
Find details of co-variate which has effect on gene expression level using edgeR and DESeq2
R RNA-Seq edgeR DESeq2 gene-expression
8.2 years ago by star ▴ 350
3
votes
3
replies
3.1k
views
find alternative allele frequency from 1000 Genomes
1000 genomes Ensembl UCSC NCBI
8.5 years ago by star ▴ 350
0
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1
reply
3.1k
views
Comment: C: find alternative allele frequency from 1000 Genomes
8.5 years ago by star ▴ 350
0
votes
1
reply
3.5k
views
Comment: C: How can get MAF for set of SNPs from each population based on 1000 Genome?
8.7 years ago by star ▴ 350
0
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1
reply
1.6k
views
Comment: C: unexpect results from p.adjust?
8.7 years ago by star ▴ 350
5
votes
5
replies
1.6k
views
unexpect results from p.adjust?
R p.adjust p-value
8.7 years ago by star ▴ 350
0
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0
replies
2.3k
views
Comment: C: How can find LD between rows (SNPs) two by two?
8.8 years ago by star ▴ 350
0
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6
replies
2.4k
views
replace value of each rows with value of column?
R statistic
8.9 years ago by star ▴ 350
0
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1
reply
2.4k
views
Comment: C: Calculate correlation for each rows?
9.0 years ago by star ▴ 350
8
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3
replies
3.2k
views
How many SNPs are sufficient for Sample identify uniquely?
human-genetics SNP statistics
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 350
0
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0
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3.1k
views
Comment: C: What is the reason for deviation from diagonal?
9.0 years ago by star ▴ 350
0
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1
reply
3.1k
views
Comment: C: What is the reason for deviation from diagonal?
9.0 years ago by star ▴ 350
5
votes
11
replies
3.1k
views
What is the reason for deviation from diagonal?
snp genetics ggplot statistics
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 350
188 results • Page 4 of 4
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