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1
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6.4k
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Comment:
Comment: How to set up bcftools plugins?
3.5 years ago by
4galaxy77
2.9k
1
vote
1
reply
793
views
Answer:
Answer: Finding length of multiple fastq.gz files
3.5 years ago by
4galaxy77
2.9k
0
votes
0
replies
669
views
Comment:
Comment: haplotype phasing with SHAPIT
3.5 years ago by
4galaxy77
2.9k
1
vote
1
reply
5.1k
views
Comment:
Comment: How to merge many huge gVCFs with high speed.
3.5 years ago by
4galaxy77
2.9k
1
vote
1
reply
4.1k
views
Answer:
Answer: bcftools multiple commands
3.5 years ago by
4galaxy77
2.9k
0
votes
0
replies
1.3k
views
Comment:
Comment: Make map file with recombination rate using plink?
3.5 years ago by
4galaxy77
2.9k
0
votes
1
reply
1.3k
views
Comment:
Comment: Make map file with recombination rate using plink?
3.5 years ago by
4galaxy77
2.9k
1
vote
1
reply
1.4k
views
Answer:
Answer: Only output SNPs in bcftools
3.5 years ago by
4galaxy77
2.9k
4
votes
0
replies
5.1k
views
Answer:
Answer: Is there a tool to draw local ancestry plots per chromosome?
3.5 years ago by
4galaxy77
2.9k
1
vote
0
replies
1.5k
views
Comment:
Comment: SHAPEIT v4 modify keep QUAL FORMAT and INFO field
3.5 years ago by
4galaxy77
2.9k
1
vote
2
replies
1.5k
views
Comment:
Comment: SHAPEIT v4 modify keep QUAL FORMAT and INFO field
3.5 years ago by
4galaxy77
2.9k
0
votes
0
replies
2.6k
views
Comment:
Comment: Filter a VCF by genotype posterior probabilities (GP) obtained when imputing w
3.5 years ago by
4galaxy77
2.9k
0
votes
1
reply
1.5k
views
Comment:
Comment: VCF file issue in merging
3.5 years ago by
4galaxy77
2.9k
1
vote
1
reply
3.1k
views
Answer:
Answer: HELP! extract variants for individual sample IDs in a multisample VCF
3.5 years ago by
4galaxy77
2.9k
1
vote
1
reply
1.3k
views
Comment:
Comment: trouble converting imputev2 files to vcf file
3.5 years ago by
4galaxy77
2.9k
0
votes
0
replies
1.9k
views
Comment:
Comment: Warning messages: In svgStyleAttributes(style, svgdev) : Removing non-S
3.5 years ago by
4galaxy77
2.9k
0
votes
0
replies
1.1k
views
Comment:
Comment: Issue on downloading fastPHASE in Mac
3.5 years ago by
4galaxy77
2.9k
0
votes
1
reply
1.9k
views
Comment:
Comment: Warning messages: In svgStyleAttributes(style, svgdev) : Removing non-S
3.5 years ago by
4galaxy77
2.9k
1
vote
1
reply
1.9k
views
Comment:
Comment: Warning messages: In svgStyleAttributes(style, svgdev) : Removing non-S
3.5 years ago by
4galaxy77
2.9k
0
votes
1
reply
2.5k
views
Answer:
Answer: How do I filter a multi-individual BCF file for genotype probabilities
3.5 years ago by
4galaxy77
2.9k
0
votes
0
replies
2.1k
views
Comment:
Comment: Running STRUCTURE from command line
3.5 years ago by
4galaxy77
2.9k
0
votes
0
replies
66k
views
Comment:
Comment: What Are The Most Common Stupid Mistakes In Bioinformatics?
3.5 years ago by
4galaxy77
2.9k
0
votes
0
replies
2.1k
views
Comment:
Comment: Running STRUCTURE from command line
3.5 years ago by
4galaxy77
2.9k
1
vote
1
reply
1.8k
views
Comment:
Comment: whatsHap didn't phase all variants
3.5 years ago by
4galaxy77
2.9k
1
vote
0
replies
810
views
Answer:
Answer: heterozygosity
3.5 years ago by
4galaxy77
2.9k
0
votes
0
replies
2.7k
views
Comment:
Comment: Beagple 5.2 phasing error
3.6 years ago by
4galaxy77
2.9k
0
votes
1
reply
913
views
Comment:
Comment: Online help missing for Populations 1.2.31
3.6 years ago by
4galaxy77
2.9k
0
votes
1
reply
2.7k
views
Comment:
Comment: Beagple 5.2 phasing error
3.6 years ago by
4galaxy77
2.9k
0
votes
1
reply
2.7k
views
Comment:
Comment: Beagple 5.2 phasing error
3.6 years ago by
4galaxy77
2.9k
0
votes
1
reply
1.3k
views
Comment:
Comment: Convert phased vcf to Chromosome/scaffold + Tag Haplotype Matrix
3.6 years ago by
4galaxy77
2.9k
0
votes
1
reply
1.3k
views
Comment:
Comment: Convert phased vcf to Chromosome/scaffold + Tag Haplotype Matrix
3.6 years ago by
4galaxy77
2.9k
3
votes
1
reply
66k
views
Answer:
Answer: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 3.6 years ago by
Ram
44k • written 3.6 years ago by
4galaxy77
2.9k
0
votes
0
replies
1.7k
views
Comment:
Comment: Possible to merge three plink bim, bed and fam files?
3.6 years ago by
4galaxy77
2.9k
0
votes
0
replies
858
views
Answer:
Answer: Trio haplotype information in the 1000 Genome Project
3.6 years ago by
4galaxy77
2.9k
0
votes
1
reply
1.3k
views
Comment:
Comment: Variant Calling with Vartrix: Warning with VCF and Error with FASTA
3.6 years ago by
4galaxy77
2.9k
0
votes
1
reply
1.7k
views
Comment:
Comment: Possible to merge three plink bim, bed and fam files?
3.6 years ago by
4galaxy77
2.9k
0
votes
1
reply
1.7k
views
Answer:
Answer: Possible to merge three plink bim, bed and fam files?
3.6 years ago by
4galaxy77
2.9k
0
votes
1
reply
888
views
Comment:
Comment: How to do damage calibration after vg map
3.6 years ago by
4galaxy77
2.9k
3
votes
0
replies
1.3k
views
Answer:
Answer: Remove 2nd colon and rest of the values in a dataframe using R/ Unix
3.6 years ago by
4galaxy77
2.9k
0
votes
1
reply
2.6k
views
Comment:
Comment: unable to impute with beagle after filtering VCF table using vcftools
3.6 years ago by
4galaxy77
2.9k
0
votes
0
replies
3.0k
views
Comment:
Comment: 1000G Tabix download: EOF marker is absent
3.6 years ago by
4galaxy77
2.9k
0
votes
0
replies
825
views
Comment:
Comment: vcf2maf produces large file after merge
3.6 years ago by
4galaxy77
2.9k
0
votes
0
replies
565
views
Comment:
Comment: Output SNP data after imputation
3.6 years ago by
4galaxy77
2.9k
0
votes
1
reply
2.2k
views
Comment:
Comment: beagle error: genotype is missing allele separator
3.6 years ago by
4galaxy77
2.9k
1
vote
0
replies
1.6k
views
Answer:
Answer: Looking for a Whole Genome Sequencing GrCH38 Control group of roughly 250 sample
3.6 years ago by
4galaxy77
2.9k
0
votes
0
replies
2.4k
views
Answer:
Answer: Future of Microarrays
3.6 years ago by
4galaxy77
2.9k
1
vote
0
replies
810
views
Comment:
Comment: SHAPEIT2 - ERROR "BAD RECOMBINATION RATE"
3.6 years ago by
4galaxy77
2.9k
4
votes
0
replies
3.1k
views
Answer:
Answer: 1000 genomes project reference panel - GRCh38
3.6 years ago by
4galaxy77
2.9k
0
votes
1
reply
1.9k
views
Answer:
Answer: How to calculate frequency of heterozygous SNPs in multisample VCF file and to
3.7 years ago by
4galaxy77
2.9k
3
votes
0
replies
2.0k
views
Answer:
Answer: What are some major historic shifts in bioinformatic methodologies?
3.7 years ago by
4galaxy77
2.9k
439 results • Page
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