Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
4
votes
1
reply
1.3k
views
What aren't hg19-hg38 liftOver chains symmetrical?
hg38 hg19 liftover
updated 3.4 years ago by ▴ 30 • written 3.4 years ago by ★ 2.9k
1
vote
1
reply
1.2k
views
Answer: Answer: BAM - number of mapping positions per read
3.4 years ago by d-cameron ★ 2.9k
2
votes
0
replies
1.6k
views
Answer: Answer: which software is the best to look at clinic structural variation in whole genom
3.6 years ago by d-cameron ★ 2.9k
0
votes
0
replies
873
views
Answer: Answer: Detecting NUMTS (nuclear mitochondrial sequences) in the whole genome sequenced
3.6 years ago by d-cameron ★ 2.9k
0
votes
0
replies
5.2k
views
Comment: Comment: GRIDSS: the Genomic Rearrangement IDentification Software Suite
3.6 years ago by d-cameron ★ 2.9k
0
votes
0
replies
2.3k
views
Comment: Comment: Issue with samtools reheader, bam file
3.8 years ago by d-cameron ★ 2.9k
1
vote
0
replies
1.5k
views
Answer: Answer: Many TLENs in a SAM file seem much too big
3.8 years ago by d-cameron ★ 2.9k
0
votes
0
replies
1.1k
views
Comment: Comment: adding a contig fasta to reference genome fasta
3.8 years ago by d-cameron ★ 2.9k
0
votes
0
replies
2.3k
views
Comment: Comment: Issue with samtools reheader, bam file
3.8 years ago by d-cameron ★ 2.9k
0
votes
1
reply
2.3k
views
Answer: Answer: Issue with samtools reheader, bam file
3.8 years ago by d-cameron ★ 2.9k
0
votes
0
replies
4.7k
views
Comment: Comment: BAM File, Change chromosome notation
3.8 years ago by d-cameron ★ 2.9k
0
votes
0
replies
4.7k
views
Answer: Answer: BAM File, Change chromosome notation
3.8 years ago by d-cameron ★ 2.9k
0
votes
0
replies
6.2k
views
Comment: Comment: BWA MEM Definition of a Primary Alignment
3.9 years ago by d-cameron ★ 2.9k
0
votes
1
reply
13k
views
Comment: Comment: samtools multithreads
4.1 years ago by d-cameron ★ 2.9k
2
votes
0
replies
1.3k
views
Answer: A: Soft Clipped read 3' end position
4.3 years ago by d-cameron ★ 2.9k
0
votes
0
replies
1.5k
views
Answer: A: bwa aln writing speed became very slow after being very fast. What is the patter
4.4 years ago by d-cameron ★ 2.9k
1
vote
0
replies
1.4k
views
Answer: A: Tools to call Large indels/structural variations in whole genome BAM data of mo
4.4 years ago by d-cameron ★ 2.9k
1
vote
0
replies
2.4k
views
Comment: C: Revert bam to fastq
4.5 years ago by d-cameron ★ 2.9k
0
votes
1
reply
1.4k
views
Comment: A: what the mean of Genomic content
4.6 years ago by d-cameron ★ 2.9k
1
vote
1
reply
1.0k
views
Answer: A: Is it possible to compute the Loss of heterocigosity from the Copy number variat
4.6 years ago by d-cameron ★ 2.9k
0
votes
0
replies
2.2k
views
Answer: A: WES or WGS
4.6 years ago by d-cameron ★ 2.9k
2
votes
1
reply
1.4k
views
Answer: A: Structural Variation data of ICGC/PCAWG: 2,658 cancers across 38 tumour types
4.6 years ago by d-cameron ★ 2.9k
0
votes
0
replies
3.1k
views
Answer: A: How to Update/Edit INFO field of VCF
updated 4.6 years ago by 45k • written 4.6 years ago by ★ 2.9k
2
votes
1
reply
3.3k
views
Answer: A: Is there a hybrid aligner that uses both long and short reads to align to a refe
4.6 years ago by d-cameron ★ 2.9k
0
votes
0
replies
815
views
Are bwa alt contigs controlled purely by idxbase.alt?
bwa
4.6 years ago by d-cameron ★ 2.9k
1
vote
1
reply
1.3k
views
Answer: A: diffrent between CNV and pcr duplicate
4.7 years ago by d-cameron ★ 2.9k
0
votes
0
replies
1.2k
views
Comment: C: HPV EBV typing from cancer genome data
4.7 years ago by d-cameron ★ 2.9k
5
votes
0
replies
14k
views
Answer: A: How to interpret variant allele frequency?
4.7 years ago by d-cameron ★ 2.9k
2
votes
1
reply
1.2k
views
Answer: A: HPV EBV typing from cancer genome data
4.7 years ago by d-cameron ★ 2.9k
0
votes
0
replies
2.4k
views
Comment: C: how to output the best alignment rather than multiple alignments for each read i
5.0 years ago by d-cameron ★ 2.9k
0
votes
0
replies
2.0k
views
Comment: C: Why Samtools view don't extract sequence out of the given region?
5.0 years ago by d-cameron ★ 2.9k
1
vote
0
replies
1.2k
views
Answer: A: Is structure variations detected in DNA panel sequencing should also be detected
5.0 years ago by d-cameron ★ 2.9k
0
votes
0
replies
1.8k
views
Answer: A: The center in scatter plot generated by CNVkit looks off
5.0 years ago by d-cameron ★ 2.9k
0
votes
0
replies
1.8k
views
Comment: C: The center in scatter plot generated by CNVkit looks off
5.0 years ago by d-cameron ★ 2.9k
0
votes
0
replies
992
views
Answer: A: [IGV] Is it an aneuploidy ?
5.0 years ago by d-cameron ★ 2.9k
0
votes
1
reply
1.8k
views
Comment: C: The center in scatter plot generated by CNVkit looks off
5.0 years ago by d-cameron ★ 2.9k
0
votes
0
replies
2.7k
views
Answer: A: Split bam into chunks but keep reads mapped to the same region together
5.0 years ago by d-cameron ★ 2.9k
0
votes
1
reply
1.8k
views
Comment: C: The center in scatter plot generated by CNVkit looks off
5.0 years ago by d-cameron ★ 2.9k
0
votes
0
replies
2.0k
views
Answer: A: What's the best way to serve VCF data on web?
5.0 years ago by d-cameron ★ 2.9k
0
votes
0
replies
1.1k
views
Comment: C: Extract SV indicating pair-end reads
5.0 years ago by d-cameron ★ 2.9k
0
votes
0
replies
1.1k
views
Comment: C: Extract SV indicating pair-end reads
5.0 years ago by d-cameron ★ 2.9k
1
vote
1
reply
1.1k
views
Answer: A: Extract SV indicating pair-end reads
5.0 years ago by d-cameron ★ 2.9k
0
votes
0
replies
2.7k
views
Comment: C: fusion detection for DNA Sequencing data
5.0 years ago by d-cameron ★ 2.9k
0
votes
1
reply
2.7k
views
Answer: A: fusion detection for DNA Sequencing data
5.0 years ago by d-cameron ★ 2.9k
0
votes
1
reply
8.4k
views
Comment: C: bwa mem memory allocation, threads and nodes
5.2 years ago by d-cameron ★ 2.9k
2
votes
0
replies
8.4k
views
Answer: A: bwa mem memory allocation, threads and nodes
5.2 years ago by d-cameron ★ 2.9k
3
votes
1
reply
1.8k
views
Answer: A: Approach to structural variation analysis - case vs control
5.5 years ago by d-cameron ★ 2.9k
0
votes
0
replies
1.6k
views
Answer: A: value of TLEN not conforming to the SAM specifications
5.6 years ago by d-cameron ★ 2.9k
0
votes
1
reply
2.2k
views
Comment: C: Number of Tandem and Interspersed duplications
5.6 years ago by d-cameron ★ 2.9k
0
votes
1
reply
2.2k
views
Comment: C: Number of Tandem and Interspersed duplications
5.6 years ago by d-cameron ★ 2.9k
327 results • Page 2 of 7
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6