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426
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Comment: Comment: PROVEAN input for stop codon
4 months ago by Vitis ★ 2.6k
0
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2
replies
426
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PROVEAN input for stop codon
variant PROVEAN
4 months ago by Vitis ★ 2.6k
0
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0
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234
views
Polyphen-2 for non-human organisms
polyphen-2
5 months ago by Vitis ★ 2.6k
0
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1
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1.5k
views
Answer: Answer: no output from GATK CombineGVCFs
17 months ago by Vitis ★ 2.6k
1
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0
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3.3k
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Answer: Answer: Seurat sctransform - does anyone know of a good explanation for biologists?
3.0 years ago by Vitis ★ 2.6k
0
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0
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5.5k
views
Answer: Answer: Biopython Seqio.Index() And Seqio.Index_Db() Very Slow For Large Sequence
3.0 years ago by Vitis ★ 2.6k
0
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0
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4.4k
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Answer: Answer: Y Chromosome Heterozygotes?
3.5 years ago by Vitis ★ 2.6k
0
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1
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5.6k
views
Comment: C: Gene expression heatmap following pseudotime analysis
3.7 years ago by Vitis ★ 2.6k
3
votes
7
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5.6k
views
Gene expression heatmap following pseudotime analysis
RNA-Seq
updated 3.7 years ago by 13k • written 3.7 years ago by ★ 2.6k
1
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0
replies
5.6k
views
Comment: C: Gene expression heatmap following pseudotime analysis
3.7 years ago by Vitis ★ 2.6k
0
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0
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5.6k
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Comment: C: Gene expression heatmap following pseudotime analysis
3.7 years ago by Vitis ★ 2.6k
1
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1
reply
3.8k
views
Comment: C: GATK GenomicsDBImport intervals
4.4 years ago by Vitis ★ 2.6k
3
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3
replies
977
views
Analysis of host-parasite mixed transcriptome
RNA-Seq alignment
updated 4.4 years ago by 147k • written 4.4 years ago by ★ 2.6k
0
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0
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977
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Comment: C: Analysis of host-parasite mixed transcriptome
4.4 years ago by Vitis ★ 2.6k
1
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0
replies
901
views
Variant calling from short/long read hybrid BAM
SNP sequencing
4.6 years ago by Vitis ★ 2.6k
1
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0
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22k
views
Answer: A: how to visualize the bedgraph and bed file
updated 4.9 years ago by 44k • written 10.5 years ago by ★ 2.6k
3
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0
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3.8k
views
Answer: A: Counting the number of paralogs in various species
updated 4.9 years ago by 44k • written 10.5 years ago by ★ 2.6k
0
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0
replies
2.0k
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Answer: A: Circos Plot for synteny file
4.9 years ago by Vitis ★ 2.6k
1
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0
replies
919
views
Answer: A: How are haplotypes/heterozygosity resolved in sequence assembly?
4.9 years ago by Vitis ★ 2.6k
0
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0
replies
3.4k
views
Answer: A: Using ensembl biomart retrieving orthologous codin sequence
updated 4.9 years ago by 44k • written 10.5 years ago by ★ 2.6k
0
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0
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2.9k
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Comment: C: Automatically Generating Robust Phylogenetic Trees
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 2.6k
0
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1
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2.9k
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Comment: C: Automatically Generating Robust Phylogenetic Trees
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 2.6k
1
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1
reply
2.9k
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Answer: A: Automatically Generating Robust Phylogenetic Trees
updated 4.9 years ago by 44k • written 10.6 years ago by ★ 2.6k
1
vote
1
reply
925
views
Answer: A: A good tutorial for eukaryotic phylogeny?
4.9 years ago by Vitis ★ 2.6k
0
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0
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2.8k
views
Comment: C: Detecting Derived Sites
updated 5.0 years ago by 44k • written 13.3 years ago by ★ 2.6k
4
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0
replies
2.7k
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Answer: A: BWA Mem -M flag (mark split hits) effect on structural variation calling
5.0 years ago by Vitis ★ 2.6k
0
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0
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945
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Answer: A: Variant Annotation and prioritization
5.0 years ago by Vitis ★ 2.6k
0
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0
replies
1.4k
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Comment: C: Mutant Transcript is higher than the WT. What may be the reason?
5.0 years ago by Vitis ★ 2.6k
0
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1
reply
2.4k
views
Comment: C: snpEff build not working with gff3
5.0 years ago by Vitis ★ 2.6k
1
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0
replies
2.3k
views
Answer: A: Visualizations of chimeric connections in different chromosomes
5.0 years ago by Vitis ★ 2.6k
1
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1
reply
1.4k
views
Comment: C: Mutant Transcript is higher than the WT. What may be the reason?
5.0 years ago by Vitis ★ 2.6k
1
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0
replies
2.6k
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Comment: C: What is in your opinion the current state-of-the-art sequencing platform for gen
5.1 years ago by Vitis ★ 2.6k
0
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0
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9.9k
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Answer: A: Insert Size For Each Bam Entry
updated 5.1 years ago by 44k • written 10.7 years ago by ★ 2.6k
1
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0
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1.0k
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Answer: A: Different alleles or paralogs?
5.2 years ago by Vitis ★ 2.6k
0
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0
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2.1k
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Comment: C: GATK JointDiscovery Error - Java Heap Space?
5.2 years ago by Vitis ★ 2.6k
0
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1
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2.1k
views
Comment: C: GATK JointDiscovery Error - Java Heap Space?
5.2 years ago by Vitis ★ 2.6k
0
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1
reply
2.1k
views
Comment: C: GATK JointDiscovery Error - Java Heap Space?
5.2 years ago by Vitis ★ 2.6k
7
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0
replies
7.4k
views
Answer: A: Ka/Ks Ratio For Within A Gene - Very Confused !!
updated 5.2 years ago by 44k • written 13.2 years ago by ★ 2.6k
0
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1
reply
1.8k
views
Comment: C: Question about generate a mappability mask file for non-human species
5.2 years ago by Vitis ★ 2.6k
1
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0
replies
7.4k
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Answer: A: Local Graphic View Of Blast Results
updated 5.2 years ago by 44k • written 13.2 years ago by ★ 2.6k
2
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0
replies
2.6k
views
Answer: A: How to replicate vcftool's sliding window SNP density?
5.2 years ago by Vitis ★ 2.6k
0
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0
replies
1.2k
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Answer: A: Efficiently run blat for long sequences
5.2 years ago by Vitis ★ 2.6k
0
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1
reply
1.8k
views
Comment: C: Question about generate a mappability mask file for non-human species
5.2 years ago by Vitis ★ 2.6k
1
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0
replies
18k
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Answer: A: Can I Access Bam File Information Without Converting To Sam?
updated 5.2 years ago by 44k • written 13.3 years ago by ★ 2.6k
2
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0
replies
4.3k
views
Answer: A: Shotgun metagenomics high duplication read rate - how high is too high?
5.2 years ago by Vitis ★ 2.6k
1
vote
0
replies
7.3k
views
Answer: A: Dump Upstream Sequence
updated 5.2 years ago by 44k • written 13.2 years ago by ★ 2.6k
10
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7
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4.4k
views
Housekeeping Gene Identifications
gene microarray meta
updated 5.3 years ago by ▴ 40 • written 13.2 years ago by ★ 2.6k
0
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0
replies
1.2k
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Comment: C: Read Count Differences in Amplicon Sequencing
5.4 years ago by Vitis ★ 2.6k
0
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0
replies
2.8k
views
Answer: A: ref and alt allele count from BAM file
5.4 years ago by Vitis ★ 2.6k
0
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1
reply
5.2k
views
Comment: C: Read-based phasing with WhatsHap
5.4 years ago by Vitis ★ 2.6k
339 results • Page 1 of 7
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